Gene PICST_46124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_46124 
Symbol 
ID4839478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp669917 
End bp670462 
Gene Length546 bp 
Protein Length181 aa 
Translation table12 
GC content36% 
IMG OID640390793 
Productpredicted protein 
Protein accessionXP_001385131 
Protein GI126137215 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACAGC CCGAAAAACT TCCTGAATCA GTGACTACAT TGTTGAAGTC AACTAGATTC 
ATCCATTTGG CAACTTCTTA CGAGGATATT CCCCATGTTT CGTTGATGAA TTATACTTAC
TATCACAAAA ATGAGAGTGA TTACATTATT ATTTCTACTC CAAAAGGCAC AACGAAGTAT
GACAACATGG TTCATAATCC AAATGTTTCG ATCTTGATTC ATGATTGGAT TTCAGCAAAG
ACAAACAGCG AAGCAAATGA CTCTCCAGCT TCCAACAGAA GAAACTCCTT GTATGAATTA
TTGGCGAACT TCAACAAGAA TGAAATTGGA CGAGTTTCTG TAACCATTAG TGGACGTGCT
GAAATACTCA CACATGACAC AGAAAAAGAT GACTACCTAT TCTACAAATC TTTGCACTTG
AATAATTCAA AAATTGACCA AGTGCAAGCA AAAAACTATA TCGAAGATGA TGACAATGCT
CTAATACTTG TTCAGATTCA TGGTTGCAAG GTGACTGACA CAGACAACAA TGTTGTGGAA
TATTAA
 
Protein sequence
MPQPEKLPES VTTLLKSTRF IHLATSYEDI PHVSLMNYTY YHKNESDYII ISTPKGTTKY 
DNMVHNPNVS ILIHDWISAK TNSEANDSPA SNRRNSLYEL LANFNKNEIG RVSVTISGRA
EILTHDTEKD DYLFYKSLHL NNSKIDQVQA KNYIEDDDNA LILVQIHGCK VTDTDNNVVE
Y