Gene PICST_36402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_36402 
Symbol 
ID4839669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1273454 
End bp1274317 
Gene Length864 bp 
Protein Length287 aa 
Translation table12 
GC content42% 
IMG OID640390984 
Productpredicted protein 
Protein accessionXP_001384932 
Protein GI126136817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0728347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAATA CTTTCTCGCT TGGACCCGAT GCGTACAAGG TGGCTTTGAA GTCTCTCAAA 
GCTTTGAAAA GTCAGGTAAA TGTCGAAAAT GGTCAAGGTG ACATTGGCAT GCCGGTCTAC
TTGATCATAA ATATCAAAAT TCCCATTGTC AGGGCCAAGG ACTACACTCC TAGAATTATA
CCCATAGCAC ACAAGTTAGA TAAGTTAGAA AATAAGTCGA TTTTGTTGGT CACCAAAGAT
CCATCCACAC CATATAGAAC GGCGTTGACT GAAAAAGATT CACCTACTGA AGACGTCTTC
AATCAGATAT ACACATTGAC TAAGCTAAAA TCCATAGCAA AAGACCCGAA AAAGGTATAC
AAACTCTTCA AAGAGTTTGA TATAGTTGTA GCTGACAACA GAGTGCATAA ATTTCTTCCA
AATATCTTGG GGGCCCAGTT TTACCTCAAG AACAAGAAGA TTCCGTACAT GGTGCAGATG
GCCAGACCGG ACCCCAACGC CGAATTGACC CGTGCAAAGA AGTCAAACAA GCTCAAGGAC
GACAGATGTG ATCCTAAGTA TGTTAAGAGC CAGATGAAGT CGATTGTAGG AAATACCTCC
TACCTCCCCA ACAGCAATGG GAACTGTTTG TCCGTGAAGG TAGGTATGCA CAACTGGGAA
GTCAAGCAAA TCTTGAAGAA CATCGATGAT GTGATTCAGT ACTTGACTGA GGATAGATTC
AGACCCGTGG GTGGTGTTTT GAAGAGTGTA GAGAATCTTG GAACCATACA TGTAAAGACA
AGTGAAAGTA TAAGTTTACC GGTATTCACA CCAGCTGACC CAGAGCCGGA AGACGACAAT
GATGATAGTG ACTTTGACTT CTAG
 
Protein sequence
MSNTFSLGPD AYKVALKSLK ALKSQVNVEN GQGDIGMPVY LIINIKIPIV RAKDYTPRII 
PIAHKLDKLE NKSILLVTKD PSTPYRTALT EKDSPTEDVF NQIYTLTKLK SIAKDPKKVY
KLFKEFDIVV ADNRVHKFLP NILGAQFYLK NKKIPYMVQM ARPDPNAELT RAKKSNKLKD
DRCDPKYVKS QMKSIVGNTS YLPNSNGNCL SVKVGMHNWE VKQILKNIDD VIQYLTEDRF
RPVGGVLKSV ENLGTIHVKT SESISLPVFT PADPEPEDDN DDSDFDF