Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_36402 |
Symbol | |
ID | 4839669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1273454 |
End bp | 1274317 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640390984 |
Product | predicted protein |
Protein accession | XP_001384932 |
Protein GI | 126136817 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0728347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAATA CTTTCTCGCT TGGACCCGAT GCGTACAAGG TGGCTTTGAA GTCTCTCAAA GCTTTGAAAA GTCAGGTAAA TGTCGAAAAT GGTCAAGGTG ACATTGGCAT GCCGGTCTAC TTGATCATAA ATATCAAAAT TCCCATTGTC AGGGCCAAGG ACTACACTCC TAGAATTATA CCCATAGCAC ACAAGTTAGA TAAGTTAGAA AATAAGTCGA TTTTGTTGGT CACCAAAGAT CCATCCACAC CATATAGAAC GGCGTTGACT GAAAAAGATT CACCTACTGA AGACGTCTTC AATCAGATAT ACACATTGAC TAAGCTAAAA TCCATAGCAA AAGACCCGAA AAAGGTATAC AAACTCTTCA AAGAGTTTGA TATAGTTGTA GCTGACAACA GAGTGCATAA ATTTCTTCCA AATATCTTGG GGGCCCAGTT TTACCTCAAG AACAAGAAGA TTCCGTACAT GGTGCAGATG GCCAGACCGG ACCCCAACGC CGAATTGACC CGTGCAAAGA AGTCAAACAA GCTCAAGGAC GACAGATGTG ATCCTAAGTA TGTTAAGAGC CAGATGAAGT CGATTGTAGG AAATACCTCC TACCTCCCCA ACAGCAATGG GAACTGTTTG TCCGTGAAGG TAGGTATGCA CAACTGGGAA GTCAAGCAAA TCTTGAAGAA CATCGATGAT GTGATTCAGT ACTTGACTGA GGATAGATTC AGACCCGTGG GTGGTGTTTT GAAGAGTGTA GAGAATCTTG GAACCATACA TGTAAAGACA AGTGAAAGTA TAAGTTTACC GGTATTCACA CCAGCTGACC CAGAGCCGGA AGACGACAAT GATGATAGTG ACTTTGACTT CTAG
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Protein sequence | MSNTFSLGPD AYKVALKSLK ALKSQVNVEN GQGDIGMPVY LIINIKIPIV RAKDYTPRII PIAHKLDKLE NKSILLVTKD PSTPYRTALT EKDSPTEDVF NQIYTLTKLK SIAKDPKKVY KLFKEFDIVV ADNRVHKFLP NILGAQFYLK NKKIPYMVQM ARPDPNAELT RAKKSNKLKD DRCDPKYVKS QMKSIVGNTS YLPNSNGNCL SVKVGMHNWE VKQILKNIDD VIQYLTEDRF RPVGGVLKSV ENLGTIHVKT SESISLPVFT PADPEPEDDN DDSDFDF
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