Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32443 |
Symbol | |
ID | 4839347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1532360 |
End bp | 1533250 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640390662 |
Product | predicted protein |
Protein accession | XP_001384986 |
Protein GI | 150865672 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0991497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAG TCTCAGTCGC CATTTTTGGA ATTGGTGGAT CCTTGGGTAA ACCAATTATC GATGCTTTTG AAACTGGTAA GTTCGACGAC AAGATCGAAC TTCCTATCAA GGTTGTAACC AGAAAGGAAT TGCCATCCAC CGACAGAATT CAATATATTG TTGGAAACTT GGACGATGAA CTGGTTGATA GTTTGGCACA GAAATTGGAT GGTACTGATG TCGTTGTTGA ATTGCTTGCT CCAAACCCTG TTTTGTTCAC AATCGTCGAG AAGATTGTTC AGAAGGTTAA GCCAAAGTTG TTCATTCCTT CCGAATTCGG TGTTGATATT GATCAGGTCA ACACCTATAT CCCTGGATTC TTGAATTCAA AAAAGACTCA TGCCAATAAT GTGAGAGGGT TTGGAATTAA AACTGTCAGT GTTGTCACTG CTATTTTTGC AGTTCCAGGC AGCATAACTT ACGAGTTGGT TGCACAAGTT GGAATTGATG TAAAGGAAAA GACCATCACA AACTTTGGTG ATCCAAACAC CAAGTTTACT GTTTCTAAGT TGGCAGACAT TGCTAATTCT GTTCTCTCTT TGACTACTTT GGATCCTCAA ACTATTCCCG ACACCGTTAG AATTCAGAGT GACGTAGTTT CCTTCCAGGA TGTTATTGAC AGATATGTTC AAACCCATGA TGTTGAATTG AAGGTAGTCA AGACAATTCC TAAGGAAGAA GTTGCAAAGA ATGTTGCAGC CAAATTTAGA AATGGATACG ACAGAAGCGA AATCTTTTTC TATTTGCAAG CAATTGCATC TCAAGGAATC GACAAGGGTT TGCACTTCAG TGAGATCCAC AACGAATTAG TCAACCCAGG AGAATCTCTC TGGAAGTGGG AGAAGTTTTA G
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Protein sequence | MSKVSVAIFG IGGSLGKPII DAFETGKFDD KIELPIKVVT RKELPSTDRI QYIVGNLDDE SVDSLAQKLD GTDVVVELLA PNPVLFTIVE KIVQKVKPKL FIPSEFGVDI DQVNTYIPGF LNSKKTHANN VRGFGIKTVS VVTAIFAVPG SITYELVAQV GIDVKEKTIT NFGDPNTKFT VSKLADIANS VLSLTTLDPQ TIPDTVRIQS DVVSFQDVID RYVQTHDVEL KVVKTIPKEE VAKNVAAKFR NGYDRSEIFF YLQAIASQGI DKGLHFSEIH NELVNPGESL WKWEKF
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