Gene PICST_32443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32443 
Symbol 
ID4839347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1532360 
End bp1533250 
Gene Length891 bp 
Protein Length296 aa 
Translation table12 
GC content40% 
IMG OID640390662 
Productpredicted protein 
Protein accessionXP_001384986 
Protein GI150865672 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0991497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAG TCTCAGTCGC CATTTTTGGA ATTGGTGGAT CCTTGGGTAA ACCAATTATC 
GATGCTTTTG AAACTGGTAA GTTCGACGAC AAGATCGAAC TTCCTATCAA GGTTGTAACC
AGAAAGGAAT TGCCATCCAC CGACAGAATT CAATATATTG TTGGAAACTT GGACGATGAA
CTGGTTGATA GTTTGGCACA GAAATTGGAT GGTACTGATG TCGTTGTTGA ATTGCTTGCT
CCAAACCCTG TTTTGTTCAC AATCGTCGAG AAGATTGTTC AGAAGGTTAA GCCAAAGTTG
TTCATTCCTT CCGAATTCGG TGTTGATATT GATCAGGTCA ACACCTATAT CCCTGGATTC
TTGAATTCAA AAAAGACTCA TGCCAATAAT GTGAGAGGGT TTGGAATTAA AACTGTCAGT
GTTGTCACTG CTATTTTTGC AGTTCCAGGC AGCATAACTT ACGAGTTGGT TGCACAAGTT
GGAATTGATG TAAAGGAAAA GACCATCACA AACTTTGGTG ATCCAAACAC CAAGTTTACT
GTTTCTAAGT TGGCAGACAT TGCTAATTCT GTTCTCTCTT TGACTACTTT GGATCCTCAA
ACTATTCCCG ACACCGTTAG AATTCAGAGT GACGTAGTTT CCTTCCAGGA TGTTATTGAC
AGATATGTTC AAACCCATGA TGTTGAATTG AAGGTAGTCA AGACAATTCC TAAGGAAGAA
GTTGCAAAGA ATGTTGCAGC CAAATTTAGA AATGGATACG ACAGAAGCGA AATCTTTTTC
TATTTGCAAG CAATTGCATC TCAAGGAATC GACAAGGGTT TGCACTTCAG TGAGATCCAC
AACGAATTAG TCAACCCAGG AGAATCTCTC TGGAAGTGGG AGAAGTTTTA G
 
Protein sequence
MSKVSVAIFG IGGSLGKPII DAFETGKFDD KIELPIKVVT RKELPSTDRI QYIVGNLDDE 
SVDSLAQKLD GTDVVVELLA PNPVLFTIVE KIVQKVKPKL FIPSEFGVDI DQVNTYIPGF
LNSKKTHANN VRGFGIKTVS VVTAIFAVPG SITYELVAQV GIDVKEKTIT NFGDPNTKFT
VSKLADIANS VLSLTTLDPQ TIPDTVRIQS DVVSFQDVID RYVQTHDVEL KVVKTIPKEE
VAKNVAAKFR NGYDRSEIFF YLQAIASQGI DKGLHFSEIH NELVNPGESL WKWEKF