Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32442 |
Symbol | |
ID | 4839346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1530573 |
End bp | 1531463 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640390661 |
Product | predicted protein |
Protein accession | XP_001384985 |
Protein GI | 150865671 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0237859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAAAG TCTCAGTCGC CTTTTTCGGA ATTAGTGGAT TCTTAGGCAA TCCAATCATC CAAGCCTTCG AAACTGGAAA GTTTGATGAC AAAATTGAAC TTCCTATCAA GGTTGTAACC AGAAAGGAAT TGCAATCCAC AGATAGGATT CAATATATTG TTGGTAACTT GGAATATGGA ATGGTCGATA GTTTTGCTCT GCAATTAGAA GGTGTTGATG TCATTGTCGA ATTGCTTGCT GTAGACCCTG CTTTATTCAC TACAGTTGAG AAAATAGTCC AAAAGGTTAA GCCAAAGTTA TTCCTTCCTT CTGAATTTGG TGTTGACATT GATCAAGTGA ACTCTTATAT CCCTGGATTC TTGAATGTAA AGAAGACTCA TGCTAATAAT GTAAGAGAGT TTGGGATTAA GACTGTTAGC GTTGTCACTG CCGAGTTTGC AGTTCCAGGT AGTTTCTTAT ATGAGTGGGT TGCACAAGTT GGAATTGACG TAAAGGAAAA GACCATCACC CATTTTGGTG ACCCAAACAC AAAGATTACA ATCTGTAAAT TGGCAGACAT TGCTAATTCT GTTCTCTCTT TGGTAACCTT GGATCCTCAA ACCATTCCTG ACACCGTTAG AATTCAGAGT GACGAAGTTA CCTTCCAGGA TGTTATTGAC AGATATGTTC AAACCCATGA TGTTGAATTG AAGGTAGTCA AGACAATTCC TAAGGAACAA GTGGCCAAAG ACATTTTAAC CAGATATGAA AGTGGCTTCA ACAAGAATGA TATTTTTCTC TATTTGCAAG CCATTGCATC TCAAGGAATC GACAAGGGTT TGCACTTCAG CGAGATTCAC AACCAATTGG TCAACCCAGG AGAATCTCTC TGGAAGTGGG AGAAGTTTTA G
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Protein sequence | MPKVSVAFFG ISGFLGNPII QAFETGKFDD KIELPIKVVT RKELQSTDRI QYIVGNLEYG MVDSFASQLE GVDVIVELLA VDPALFTTVE KIVQKVKPKL FLPSEFGVDI DQVNSYIPGF LNVKKTHANN VREFGIKTVS VVTAEFAVPG SFLYEWVAQV GIDVKEKTIT HFGDPNTKIT ICKLADIANS VLSLVTLDPQ TIPDTVRIQS DEVTFQDVID RYVQTHDVEL KVVKTIPKEQ VAKDILTRYE SGFNKNDIFL YLQAIASQGI DKGLHFSEIH NQLVNPGESL WKWEKF
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