Gene PICST_32442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32442 
Symbol 
ID4839346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1530573 
End bp1531463 
Gene Length891 bp 
Protein Length296 aa 
Translation table12 
GC content39% 
IMG OID640390661 
Productpredicted protein 
Protein accessionXP_001384985 
Protein GI150865671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0237859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAG TCTCAGTCGC CTTTTTCGGA ATTAGTGGAT TCTTAGGCAA TCCAATCATC 
CAAGCCTTCG AAACTGGAAA GTTTGATGAC AAAATTGAAC TTCCTATCAA GGTTGTAACC
AGAAAGGAAT TGCAATCCAC AGATAGGATT CAATATATTG TTGGTAACTT GGAATATGGA
ATGGTCGATA GTTTTGCTCT GCAATTAGAA GGTGTTGATG TCATTGTCGA ATTGCTTGCT
GTAGACCCTG CTTTATTCAC TACAGTTGAG AAAATAGTCC AAAAGGTTAA GCCAAAGTTA
TTCCTTCCTT CTGAATTTGG TGTTGACATT GATCAAGTGA ACTCTTATAT CCCTGGATTC
TTGAATGTAA AGAAGACTCA TGCTAATAAT GTAAGAGAGT TTGGGATTAA GACTGTTAGC
GTTGTCACTG CCGAGTTTGC AGTTCCAGGT AGTTTCTTAT ATGAGTGGGT TGCACAAGTT
GGAATTGACG TAAAGGAAAA GACCATCACC CATTTTGGTG ACCCAAACAC AAAGATTACA
ATCTGTAAAT TGGCAGACAT TGCTAATTCT GTTCTCTCTT TGGTAACCTT GGATCCTCAA
ACCATTCCTG ACACCGTTAG AATTCAGAGT GACGAAGTTA CCTTCCAGGA TGTTATTGAC
AGATATGTTC AAACCCATGA TGTTGAATTG AAGGTAGTCA AGACAATTCC TAAGGAACAA
GTGGCCAAAG ACATTTTAAC CAGATATGAA AGTGGCTTCA ACAAGAATGA TATTTTTCTC
TATTTGCAAG CCATTGCATC TCAAGGAATC GACAAGGGTT TGCACTTCAG CGAGATTCAC
AACCAATTGG TCAACCCAGG AGAATCTCTC TGGAAGTGGG AGAAGTTTTA G
 
Protein sequence
MPKVSVAFFG ISGFLGNPII QAFETGKFDD KIELPIKVVT RKELQSTDRI QYIVGNLEYG 
MVDSFASQLE GVDVIVELLA VDPALFTTVE KIVQKVKPKL FLPSEFGVDI DQVNSYIPGF
LNVKKTHANN VREFGIKTVS VVTAEFAVPG SFLYEWVAQV GIDVKEKTIT HFGDPNTKIT
ICKLADIANS VLSLVTLDPQ TIPDTVRIQS DEVTFQDVID RYVQTHDVEL KVVKTIPKEQ
VAKDILTRYE SGFNKNDIFL YLQAIASQGI DKGLHFSEIH NQLVNPGESL WKWEKF