Gene PICST_32431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32431 
Symbol 
ID4839728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1500085 
End bp1500957 
Gene Length873 bp 
Protein Length290 aa 
Translation table12 
GC content52% 
IMG OID640391043 
Productpredicted protein 
Protein accessionXP_001384976 
Protein GI150865663 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.425894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.599595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTGA ACAATCTCGT CAGTAGCGGA ACTGCAACCA CTGCAGCTCC TTCTGTCAAG 
GTTGATGCTA CAGCTCCGGC TTCCGAAGCT TCGCAGAGAG TCAGCTTGCC TCCCATATCA
GATATCTTGG TGAGCCGCTT GCCGCCAGTT CCTGGTGCGC CATCTTCGAG CTCGATCTTA
CCGCCACTTC CTCACCAATC TCTTCCATTT GCCGGAGGTC CTCCGCCAGT TCCGCAACAA
GATAGCCGGA ACCTCCCTCC AAACTACAAG TACTACGACT ACTACTACGG TCTGAACGTT
CCATCTCATC TGCTTGCCAA CCATCTGATT TCACATCTGA CTGCGTTGAC GAGGTCGCCG
TTGTCACACA ACTCTCTGCC CGTATACGGA ACAAACACCA CACCTCCACC GGCACCTCCA
ACATTGAGAC ACAACTCGAC CAACTCATAC AACCTCAACG TCCAGTATCC CCCACATCAG
CATCAACACA TCCCTCACCC ACATCAGCCT CCTCACTTGT ACAAAACGCA CAGCCTGCCT
ATCGGAGGCA TTCCCACTAT TTTGGGAGCA CACATCCACC AGGGCGTGCA GCACCTTCAC
CAGCGTCAGC AGGCACATGA GTTGGACGAC GAGAGACTGT TGTCGCCTGG CAACAAGCGT
AAAACGAGAA ACAACTTGCC CAAGGAGATC ACATACATCT TGCTCAAGTG GTTGAACGAC
CACTTGAGCC ACCCATACCC TAACTCGTTT GAAAAGAACC AGTTGATGAT GATGACCGGA
TTGAACCAGC AGCAGTTGAG CAACTGGTTC ATCAACGCCA GAAGAAGAAA AATCAAGCTG
TTGAAGGAAC AGAAGCGTTT GAACTTGGTG TAG
 
Protein sequence
MNLNNLVSSG TATTAAPSVK VDATAPASEA SQRVSLPPIS DILVSRLPPV PGAPSSSSIL 
PPLPHQSLPF AGGPPPVPQQ DSRNLPPNYK YYDYYYGSNV PSHSLANHSI SHSTALTRSP
LSHNSSPVYG TNTTPPPAPP TLRHNSTNSY NLNVQYPPHQ HQHIPHPHQP PHLYKTHSSP
IGGIPTILGA HIHQGVQHLH QRQQAHELDD ERSLSPGNKR KTRNNLPKEI TYILLKWLND
HLSHPYPNSF EKNQLMMMTG LNQQQLSNWF INARRRKIKS LKEQKRLNLV