Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32431 |
Symbol | |
ID | 4839728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1500085 |
End bp | 1500957 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 12 |
GC content | 52% |
IMG OID | 640391043 |
Product | predicted protein |
Protein accession | XP_001384976 |
Protein GI | 150865663 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.425894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.599595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTGA ACAATCTCGT CAGTAGCGGA ACTGCAACCA CTGCAGCTCC TTCTGTCAAG GTTGATGCTA CAGCTCCGGC TTCCGAAGCT TCGCAGAGAG TCAGCTTGCC TCCCATATCA GATATCTTGG TGAGCCGCTT GCCGCCAGTT CCTGGTGCGC CATCTTCGAG CTCGATCTTA CCGCCACTTC CTCACCAATC TCTTCCATTT GCCGGAGGTC CTCCGCCAGT TCCGCAACAA GATAGCCGGA ACCTCCCTCC AAACTACAAG TACTACGACT ACTACTACGG TCTGAACGTT CCATCTCATC TGCTTGCCAA CCATCTGATT TCACATCTGA CTGCGTTGAC GAGGTCGCCG TTGTCACACA ACTCTCTGCC CGTATACGGA ACAAACACCA CACCTCCACC GGCACCTCCA ACATTGAGAC ACAACTCGAC CAACTCATAC AACCTCAACG TCCAGTATCC CCCACATCAG CATCAACACA TCCCTCACCC ACATCAGCCT CCTCACTTGT ACAAAACGCA CAGCCTGCCT ATCGGAGGCA TTCCCACTAT TTTGGGAGCA CACATCCACC AGGGCGTGCA GCACCTTCAC CAGCGTCAGC AGGCACATGA GTTGGACGAC GAGAGACTGT TGTCGCCTGG CAACAAGCGT AAAACGAGAA ACAACTTGCC CAAGGAGATC ACATACATCT TGCTCAAGTG GTTGAACGAC CACTTGAGCC ACCCATACCC TAACTCGTTT GAAAAGAACC AGTTGATGAT GATGACCGGA TTGAACCAGC AGCAGTTGAG CAACTGGTTC ATCAACGCCA GAAGAAGAAA AATCAAGCTG TTGAAGGAAC AGAAGCGTTT GAACTTGGTG TAG
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Protein sequence | MNLNNLVSSG TATTAAPSVK VDATAPASEA SQRVSLPPIS DILVSRLPPV PGAPSSSSIL PPLPHQSLPF AGGPPPVPQQ DSRNLPPNYK YYDYYYGSNV PSHSLANHSI SHSTALTRSP LSHNSSPVYG TNTTPPPAPP TLRHNSTNSY NLNVQYPPHQ HQHIPHPHQP PHLYKTHSSP IGGIPTILGA HIHQGVQHLH QRQQAHELDD ERSLSPGNKR KTRNNLPKEI TYILLKWLND HLSHPYPNSF EKNQLMMMTG LNQQQLSNWF INARRRKIKS LKEQKRLNLV
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