| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32412 |
|---|
| Symbol | PAK3 |
|---|
| ID | 4839431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | + |
|---|
| Start bp | 1458060 |
|---|
| End bp | 1459250 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640390746 |
|---|
| Product | ser/thr protein kinase |
|---|
| Protein accession | XP_001384968 |
|---|
| Protein GI | 150865656 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.715644 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGT CTAGCACTAT GACACCAGCT TCCAGTGGAA GAGTGATCAC TAATGGTTAC
AGCACCAGTC CATTACTGAA GAGCCCCACT TCTCCAACTG GATCAAAACT ATTATTGGAA
TCGCTTGCTT CCAACAGCCA TACATATACG CTTGATTCGC CAGTGTCCTC CTACTCAGTT
CTTGGGAAGG ACTACTTTCA GTCAGGAAAG GAGCCGATCT ACGAAGGTGC TAACGGGATT
GTCCGAAAAG CTACGGATAG GACACGGACA CTAACGTTGA TCATAAAAAG GATCAAACAG
AGAGACCAGT CTACTCAGCA CTACAAGAAG TCTGTTATTA TGGAATATGA TACCATCAGA
GCCTGTAACC ACAAGAACAT CGTCCAGATT TTGGACATCG CTGTTATTCC CGATTCATCT
GATTTGTGCT TAGTGTACCC ATACTACCCT AAGGGTGACC TTCTAGACTT GATGTGTCAG
GTGAGAAGGT TTAAGATCGA AACGTCGGCA AGCTTGAAGG ATTCTGTTTT CAAACAGATC
TTGAAGGGAG TCAACTACTT GCATTCCAAG AACATCATCC ATCGTGATTT GAAGACAGAA
AACTGCTTGA TAGATGCTGA CGGGGTTATT AAAATTGCTG ATTTCGGGTA TGCTTTGAAT
CTTAACGATG ACCGATTCAA GGGCTACTTG AAAGAGAACC CCGTTGAATT CTATTGTGGA
ACTGCAAGTT TCAAGGCCCC AGAGTTGTTC GTTATTGAAG ATGAAATCAA CAAGGAAGAG
TTCTCGTTTG ACCAATACTT GGAGAATATC GAGGTGATGA AGTATGTGGA CTACTGGTCT
CTAGGCATAA TATACTTGAA CATATACTTG ATGAAGTCTC CCTGGAACAA TGCAAATGCA
CTCGATCCGA AGAACATCGC ATTTACAAAG TACCAAAAAT ACTATCCCGA GAATGATTCA
CAGCTTTCCC TTATAATCAA GGACTTGAAC AGGAGCTCTT CGTCATTTAG CAACAACCCT
GCCTTGGCCT TGTTCAAGAA TTTGCATTAC GATTCCAGAG AGTATATTCT TGGAATGTTG
AATCCAACGC CGGATAGACG GTTGTCTCCC AAGGAAGTTC TCGATTCCAA TTGGCTTAGC
CAGGTTTATT CACCACCAAA AGACTTGGTT AACTTGATAA AATCAAAGTA G
|
|---|
| Protein sequence | MLKSSTMTPA SSGRVITNGY STSPLSKSPT SPTGSKLLLE SLASNSHTYT LDSPVSSYSV
LGKDYFQSGK EPIYEGANGI VRKATDRTRT LTLIIKRIKQ RDQSTQHYKK SVIMEYDTIR
ACNHKNIVQI LDIAVIPDSS DLCLVYPYYP KGDLLDLMCQ VRRFKIETSA SLKDSVFKQI
LKGVNYLHSK NIIHRDLKTE NCLIDADGVI KIADFGYALN LNDDRFKGYL KENPVEFYCG
TASFKAPELF VIEDEINKEE FSFDQYLENI EVMKYVDYWS LGIIYLNIYL MKSPWNNANA
LDPKNIAFTK YQKYYPENDS QLSLIIKDLN RSSSSFSNNP ALALFKNLHY DSREYILGML
NPTPDRRLSP KEVLDSNWLS QVYSPPKDLV NLIKSK
|
|---|
| |