Gene PICST_32391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32391 
Symbol 
ID4839523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1395858 
End bp1396556 
Gene Length699 bp 
Protein Length232 aa 
Translation table12 
GC content44% 
IMG OID640390838 
Productpredicted protein 
Protein accessionXP_001384955 
Protein GI150865645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.242071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTACG AAACCAAACT TGTATTCCAA GTAGGGCTCC TCCTATTGCC TATTTTTGTG 
GTGGCCCTCA GAGTGTTAGC CATCTTACCC TCAGTAGGAT TAGGTAGCCT GAACAAAGAT
CTCAAGAGTA TTTCAGATAT AACACTGGGA ACAGGTCTGA GTATCATGGT TTTGCTTGGA
TCAGGTGGCC ATACAGGTGA GATGATGAGG ATATTGTCCA ATGTCGATTT GAGTTCTGTC
AGGCGAACCT GGGTGGTATC TAGTGGAGAT TCATCTTCTC TCGTTAGAGC CAAAGAGTTC
GAAGACAAGT ATCAGCAAAA TGGTAAAACC TGCAAGTCTT CGGAGTATTT GACTTTGTAT
AGAGCTAGAA AAGTAGGCGA GTCGTTGCTT CTGTCTTTGA ACAGCACCGT GAGGTCATTT
GTTGATACTG TGAACCAATT GCGTAAGTTG CCGGAACTTC CCTCTGTTCT CTTGCTTAAT
GGGCCAGGAA CGTCTGTTCC TTTGGCTTAT ATCTTGTTTG GAATGAAGTT CTTCGGCCTT
TGCAATACAC GCATCATCTA CATAGAAAGT CTTGCCCGGG TGAACAAGCT TAGTTTGAGT
GGGTTGTTGC TTCTTCCCAT CTCCGATAGG TTTATAGTGC AATGGGAGCA ATTGTACCAT
AAGTACAAGA GAGCAGAGTA CTACGGTATA CTCATATAG
 
Protein sequence
MDYETKLVFQ VGLLLLPIFV VALRVLAILP SVGLGSSNKD LKSISDITSG TGSSIMVLLG 
SGGHTGEMMR ILSNVDLSSV RRTWVVSSGD SSSLVRAKEF EDKYQQNGKT CKSSEYLTLY
RARKVGESLL SSLNSTVRSF VDTVNQLRKL PELPSVLLLN GPGTSVPLAY ILFGMKFFGL
CNTRIIYIES LARVNKLSLS GLLLLPISDR FIVQWEQLYH KYKRAEYYGI LI