Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32391 |
Symbol | |
ID | 4839523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1395858 |
End bp | 1396556 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640390838 |
Product | predicted protein |
Protein accession | XP_001384955 |
Protein GI | 150865645 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.242071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTACG AAACCAAACT TGTATTCCAA GTAGGGCTCC TCCTATTGCC TATTTTTGTG GTGGCCCTCA GAGTGTTAGC CATCTTACCC TCAGTAGGAT TAGGTAGCCT GAACAAAGAT CTCAAGAGTA TTTCAGATAT AACACTGGGA ACAGGTCTGA GTATCATGGT TTTGCTTGGA TCAGGTGGCC ATACAGGTGA GATGATGAGG ATATTGTCCA ATGTCGATTT GAGTTCTGTC AGGCGAACCT GGGTGGTATC TAGTGGAGAT TCATCTTCTC TCGTTAGAGC CAAAGAGTTC GAAGACAAGT ATCAGCAAAA TGGTAAAACC TGCAAGTCTT CGGAGTATTT GACTTTGTAT AGAGCTAGAA AAGTAGGCGA GTCGTTGCTT CTGTCTTTGA ACAGCACCGT GAGGTCATTT GTTGATACTG TGAACCAATT GCGTAAGTTG CCGGAACTTC CCTCTGTTCT CTTGCTTAAT GGGCCAGGAA CGTCTGTTCC TTTGGCTTAT ATCTTGTTTG GAATGAAGTT CTTCGGCCTT TGCAATACAC GCATCATCTA CATAGAAAGT CTTGCCCGGG TGAACAAGCT TAGTTTGAGT GGGTTGTTGC TTCTTCCCAT CTCCGATAGG TTTATAGTGC AATGGGAGCA ATTGTACCAT AAGTACAAGA GAGCAGAGTA CTACGGTATA CTCATATAG
|
Protein sequence | MDYETKLVFQ VGLLLLPIFV VALRVLAILP SVGLGSSNKD LKSISDITSG TGSSIMVLLG SGGHTGEMMR ILSNVDLSSV RRTWVVSSGD SSSLVRAKEF EDKYQQNGKT CKSSEYLTLY RARKVGESLL SSLNSTVRSF VDTVNQLRKL PELPSVLLLN GPGTSVPLAY ILFGMKFFGL CNTRIIYIES LARVNKLSLS GLLLLPISDR FIVQWEQLYH KYKRAEYYGI LI
|
| |