Gene PICST_32328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32328 
Symbol 
ID4839568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1235477 
End bp1236535 
Gene Length1059 bp 
Protein Length352 aa 
Translation table12 
GC content40% 
IMG OID640390883 
Productpredicted protein 
Protein accessionXP_001385243 
Protein GI150865858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.611775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.253741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCT TTCTCGACGA TTATTCGGAA TCCTTGGAAC AATTTGAGTC GTTTCGTGCC 
GACGACCAAG ATGTACATCA ACATATAACC AGCGGTGAAC ATGACCCTGT AGATGGAGAT
TCCAATGTTG CGGATGCCGA ACAGGATGAT CTCCTTGGTC TTGATACCCA AATTAAGTTG
ACTAAGAGAA AACCAACTGC TCGTGTAGAT AACAACAGAA TATTCAGTCA AAAAGGGTTA
GGGTACCTTT TGAAGAATCA CCATAAACTT CTGAAAACGA TACAAAGAAA TGACAAGCAG
TTTGAGGAGA AATCCAAGAA CGGTCGCGTT CACAGAGCAC AGAAATTTCA ACATGAATAC
GATAACTTGT CCTCTGTATT GCAGTTCTAC CAATTGTGGT GCCACGGCAT GTTTCCTAAA
GCCAACTTCA AAGACTGTGT GCATTTGTTG CGATTGTTGG GAGCTAAGTC CCCCAGATTA
AGACTATACA GAAGAGAATT GATAGAACAG GAGATCATTA AGTTGAAGGA GGCTAGTGGC
ATAATTGTTG AACAAGAAGA ACGAGAAAAT ACACTTCAAG CAGGGAATAT AATTGTTGAT
GCTGAGAATC AAGAAACAGA AGATATTATT GAAGCATCAA ACATTAATAA CGTTGTATCC
ACTGAAACGT CAGGTGAAAC AAATGGTTTA TTTGTTGGCG ATAATGATGA CGATGACTTG
TATCACACCC CTCCTCCTCC AGAAACAGTT TCCCCAAATA TAGCAGTACT GTCTATTGTG
GTTTCTAAAC CAGACTTGGC TGATATCACT GGTGTTTCGG ATACTGATAC CACCATAGTT
GACAAATCTG AAGTTAACAT TCAACCTATA GCAATACCAG TGTTAACTCA AGTATCTGAT
CTTACAAATA CTACCAACAA TGAATCTGAC CATGACGCTT TCTCTGATGA CGATGATTTC
TATGCTCTGC TTAATGAAAC ATTCGTTCAT CAAGAACGAC CACCTCAAGA GTCCGACTAC
GATGCCGAAG AGGAAGTAAT GAAAGAAATG GGGCTATGA
 
Protein sequence
MSGFLDDYSE SLEQFESFRA DDQDVHQHIT SGEHDPVDGD SNVADAEQDD LLGLDTQIKL 
TKRKPTARVD NNRIFSQKGL GYLLKNHHKL SKTIQRNDKQ FEEKSKNGRV HRAQKFQHEY
DNLSSVLQFY QLWCHGMFPK ANFKDCVHLL RLLGAKSPRL RLYRRELIEQ EIIKLKEASG
IIVEQEEREN TLQAGNIIVD AENQETEDII EASNINNVVS TETSGETNGL FVGDNDDDDL
YHTPPPPETV SPNIAVSSIV VSKPDLADIT GVSDTDTTIV DKSEVNIQPI AIPVLTQVSD
LTNTTNNESD HDAFSDDDDF YASLNETFVH QERPPQESDY DAEEEVMKEM GL