Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32328 |
Symbol | |
ID | 4839568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 1235477 |
End bp | 1236535 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640390883 |
Product | predicted protein |
Protein accession | XP_001385243 |
Protein GI | 150865858 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.611775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.253741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGCT TTCTCGACGA TTATTCGGAA TCCTTGGAAC AATTTGAGTC GTTTCGTGCC GACGACCAAG ATGTACATCA ACATATAACC AGCGGTGAAC ATGACCCTGT AGATGGAGAT TCCAATGTTG CGGATGCCGA ACAGGATGAT CTCCTTGGTC TTGATACCCA AATTAAGTTG ACTAAGAGAA AACCAACTGC TCGTGTAGAT AACAACAGAA TATTCAGTCA AAAAGGGTTA GGGTACCTTT TGAAGAATCA CCATAAACTT CTGAAAACGA TACAAAGAAA TGACAAGCAG TTTGAGGAGA AATCCAAGAA CGGTCGCGTT CACAGAGCAC AGAAATTTCA ACATGAATAC GATAACTTGT CCTCTGTATT GCAGTTCTAC CAATTGTGGT GCCACGGCAT GTTTCCTAAA GCCAACTTCA AAGACTGTGT GCATTTGTTG CGATTGTTGG GAGCTAAGTC CCCCAGATTA AGACTATACA GAAGAGAATT GATAGAACAG GAGATCATTA AGTTGAAGGA GGCTAGTGGC ATAATTGTTG AACAAGAAGA ACGAGAAAAT ACACTTCAAG CAGGGAATAT AATTGTTGAT GCTGAGAATC AAGAAACAGA AGATATTATT GAAGCATCAA ACATTAATAA CGTTGTATCC ACTGAAACGT CAGGTGAAAC AAATGGTTTA TTTGTTGGCG ATAATGATGA CGATGACTTG TATCACACCC CTCCTCCTCC AGAAACAGTT TCCCCAAATA TAGCAGTACT GTCTATTGTG GTTTCTAAAC CAGACTTGGC TGATATCACT GGTGTTTCGG ATACTGATAC CACCATAGTT GACAAATCTG AAGTTAACAT TCAACCTATA GCAATACCAG TGTTAACTCA AGTATCTGAT CTTACAAATA CTACCAACAA TGAATCTGAC CATGACGCTT TCTCTGATGA CGATGATTTC TATGCTCTGC TTAATGAAAC ATTCGTTCAT CAAGAACGAC CACCTCAAGA GTCCGACTAC GATGCCGAAG AGGAAGTAAT GAAAGAAATG GGGCTATGA
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Protein sequence | MSGFLDDYSE SLEQFESFRA DDQDVHQHIT SGEHDPVDGD SNVADAEQDD LLGLDTQIKL TKRKPTARVD NNRIFSQKGL GYLLKNHHKL SKTIQRNDKQ FEEKSKNGRV HRAQKFQHEY DNLSSVLQFY QLWCHGMFPK ANFKDCVHLL RLLGAKSPRL RLYRRELIEQ EIIKLKEASG IIVEQEEREN TLQAGNIIVD AENQETEDII EASNINNVVS TETSGETNGL FVGDNDDDDL YHTPPPPETV SPNIAVSSIV VSKPDLADIT GVSDTDTTIV DKSEVNIQPI AIPVLTQVSD LTNTTNNESD HDAFSDDDDF YASLNETFVH QERPPQESDY DAEEEVMKEM GL
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