| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32327 |
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| Symbol | |
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| ID | 4839567 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 1233682 |
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| End bp | 1235393 |
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| Gene Length | 1712 bp |
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| Protein Length | 467 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640390882 |
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| Product | predicted protein |
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| Protein accession | XP_001384921 |
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| Protein GI | 150865623 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.120458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.290512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGC GACACACCAA CATATTATGG CATAAATTGC ATACAGCGAA GACTTTCGCT
TATTCAAGAC TGCACTGCGA TTCTCTATTC TTTTTCACTA AGCTATTGCC GCAAAAATAG
CTGCGAAAAA TAGCTGCGAA TATATCTCTC AACCTTTCTA GCCATTACTC TTCTTTAAGT
TCAACAGCCG CTTTTAATAC CTTGATGAAC CATTCAAGCA AGGACCCAGG AACTTCTTCC
CTGAAGGCAA GGAAGCCCAA GACCGTCAAC AGCAGCGTCA AGCCGGATCT GATAATCAGA
ATTGGTATTA ATAACGGTAC TGAATTTAGA AATATCCCGC TCACTACATC CCAGTTTCTA
GACGCATATT CAAAAGTAAG TTAGATTACA TTGTACAATA ACTAGATTAA ATATTAACAT
AAAAAGGGTA AGTGGAACTT GTCCAATGTG CCCTGTCCAC CTTGTATGGA GCCGGTTGGA
TTTTTGAAGG CTCCCGAATG CTATAGAGAA TCACTCCGCA GAGAGCCAGT TCTCAAGTAT
TCCAAACTTG ACCATTGGAA TGACAAGAGC ATATTCAAGA AAATTATTGT TAGACTTAGA
AAGACTTTCA ATGTTAGTGG CGTTTCCATT TCAATTATAG ACAACACAAA AACTATGATC
AAAATCGAAA CGCTGTTGAA TGTGAGCGAG ATTCCCAGAG GCGTCTCTAT AGATTGTCAT
GCTATTCTAT CACAGGGATA CTTTCTTATT TTGGATACTA CAAAGGATTG GAGAACATCC
CAGAATCCGT TTGTTACTGG ACTACCATTT ATTAAGTTCT ACTGCGGTGT GCCATTGTTA
ACCCAGACAG GCGAAGCCAT TGGCGTATTA GCTATTTTTG ATTCGTTCGC GAAGCCAACG
TTTTCAGAAG AGAATTGTCA TAAGCTTCAG GACATCAGCA AAGAGGTCGT GGAGATGTTG
GATACACCAA GCGAAACCTT CACAAAAGCA AAGAAGTCAA ATGAGAGCAA CCTTCAATTG
GACAATGAAT TAAATGAGTT GAACCAACGG CTTGGAAGAG CTACCAGCAC GAAGTCCTTA
CTCAAGACTG TTTTTGAAAA AGATGGTTCA GGTGGTCCGT ACTCCCAAAA CCACAATTTT
AGATTTAACA GGATACTAAA AGGCGAAGAT AATAAAATGC AACACAAGAT AATCTGGGAT
AAGCTATTCC GTATTGGTTC GTTGAAAAAT GCGGCATCAT CTTTGGCTAA CAGTATCTCA
ATTATCTATA AAATTGAATT GGTCTATTTC ATTGAAATAA GAATTGCTGA ACCGTACCAG
ACAGCACCAG AATACTTCCC TGCTAATGAG GTGAAAATCG AAGCTGAAAA TTACCGTCAT
GCCAATAAAT TGATCAAAAA AGAAAACCAG GAAAGTGAGT ACATGAGTAG AATCATTGGA
GGTAACTCTA GTGCAACTTT TTGCCTCGAC AATTCGATTT TGTACAAAGC CTTCACATCA
GAATTCGGAG TTGAGTACAT CAACAAGGTG ACAAAATACA AGTACAATAA GGGAATCATA
ATGCCGTTCT ACAGAAACAA CTCCAAGCTT GTTCGCAAAT CACAAGCATC TGACAAAAAG
GTACTTGATG TATTCTTACG AAGTGGGGGG TACCTAATAG CATGTTTTAA TGAGTCTGCA
GAGTTTGATT TCAGCCCCGA AGTTGTATCT GA
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| Protein sequence | MTAFNTLMNH SSKDPGTSSS KARKPKTVNS SVKPDSIIRI GINNGTEFRN IPLTTSQFLD
AYSKGKWNLS NVPCPPCMEP VGFLKAPECY RESLRREPVL KYSKLDHWND KSIFKKIIVR
LRKTFNVSGV SISIIDNTKT MIKIETSLNV SEIPRGVSID CHAILSQGYF LILDTTKDWR
TSQNPFVTGL PFIKFYCGVP LLTQTGEAIG VLAIFDSFAK PTFSEENCHK LQDISKEVVE
MLDTPSETFT KAKKSNESNL QLDNELNELN QRLGRATSTK SLLKTVFEKD GSGGPYSQNH
NFRFNRILKG EDNKMQHKII WDKLFRIGSL KNAASSLANS ISIIYKIELV YFIEIRIAEP
YQTAPEYFPA NEVKIEAENY RHANKLIKKE NQESEYMSRI IGGNSSATFC LDNSILYKAF
TSEFGVEYIN KVTKYKYNKG IIMPFYRNNS KLVRKSQASD KKPRSCI
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