| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32309 |
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| Symbol | EFH1 |
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| ID | 4839302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1189919 |
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| End bp | 1191076 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390617 |
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| Product | basic helix-loop-helix transcription factor |
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| Protein accession | XP_001385235 |
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| Protein GI | 150865852 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.655952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAACAC CTAGTCAGGC AAACTTGTAC AATCAAGAGT TCACTGGCAC AACTGCTTCA
GAACAGAATT TATTACCTCA GTCACAAAAC AATACCCACT CGGAAATCCA TATTCTTCAA
CAACTTCCTC ACCAAATACA ACATTCCCGA CCAAAGTCTT ACATGCTAAA CGAACCTTAT
ATTCCATTAC CGCCGAATTA TCAAGCAGTC CAACAAAATG AATACTACAC TAACAACGAC
TATGGAAATA ACTTGAACAC TATTAGTCCA TCTCTTCCGC TAACCAACCT TACTCAAGGT
ACTTCCTCTG GCGGACAACA GGGGTCAGCT GAACAGCTAT CTGTGCCTAT TCAGCAACAA
AGTATAATTC AATCACAACA TGATCAGCAT CTGCATGTTT ATCCTTCTGT ATTCCAACAG
CAACAACAAC AATTTTATCA ACAGCAGCAA CAGCCGCTTG GATTGCAAAA TCCCTACCAA
GCCCAACATA CCCATATGAT GGCCCCTTCA ACATATCCCA AACCGCTCCA TAACCACTCT
AACTCAAATA CTTCAACTAC AACCAACTCT TCACTGAAAA TCTCACACTC AAGAAATTCA
TCCTCTTCTA GTACTGTCCA AGAATATCCA GACGTTGCAA AGCCGAAAAT TGCTACTGTC
TTCTGGGAGG ACGAAAAGAC TATATGCTAC CAGGTGAGAG CAAGAGGTGT CTTAGTTTCT
AGAAGAGAAG ATACTAACTT TGTCAATGGT ACAAAATTGT TGAATGTAAT AGGGATGACT
CGAGGTAAAA GGGATGGTAT TCTCAAGACG GAAAAGACCC GCAACGTTGT CAAGGTAGGA
TCCATGAACC TCAAAGGGGT CTGGATTCCT TTCGACAGAG CATTCGAAAT TGCTAGAAAC
GAAGGAGTTG ATGAAGCATT GCACCCACTC TTTGTCAAGG ACATTAAGAC CTTTTACAAG
ACTAAAGGTT ACAAATTGAA GATTTCAACA GAGGGTAATC AGATCGTCAA AACCCCGGTT
GGCAGTCCCA TACAATCCAC AAGTCCTGGC ACCATTGATG AAAAGGGACC AATTAGAACC
ACCACACCCA TGGTATTCAA CTCGTCAGAC GCTTTGAAGA ATCAAAATTC CTTTCGCACT
GACTGCTATG AATCTTGA
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| Protein sequence | MSTPSQANLY NQEFTGTTAS EQNLLPQSQN NTHSEIHILQ QLPHQIQHSR PKSYMLNEPY
IPLPPNYQAV QQNEYYTNND YGNNLNTISP SLPLTNLTQG TSSGGQQGSA EQLSVPIQQQ
SIIQSQHDQH SHVYPSVFQQ QQQQFYQQQQ QPLGLQNPYQ AQHTHMMAPS TYPKPLHNHS
NSNTSTTTNS SSKISHSRNS SSSSTVQEYP DVAKPKIATV FWEDEKTICY QVRARGVLVS
RREDTNFVNG TKLLNVIGMT RGKRDGILKT EKTRNVVKVG SMNLKGVWIP FDRAFEIARN
EGVDEALHPL FVKDIKTFYK TKGYKLKIST EGNQIVKTPV GSPIQSTSPG TIDEKGPIRT
TTPMVFNSSD ALKNQNSFRT DCYES
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