Gene PICST_32266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32266 
Symbol 
ID4839708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1075532 
End bp1077700 
Gene Length2169 bp 
Protein Length722 aa 
Translation table12 
GC content40% 
IMG OID640391023 
Productpredicted protein 
Protein accessionXP_001384884 
Protein GI150865604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.110274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.90348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGAC GCCAGGGCAG GTCTTTCGTC CTCGTTTTGG CGTTGCTAGC AATATTAGTG 
ACTTTGCACT TATTTTTTTG GGATGATAAA CTAGACATTA GAAGCAAGGT TTTCAAGCAG
AAGAATTCTG GACAAGTTCC AACAAATAAA GCCGAAGTCC CCCCAAAGCC AGGTCTGAAA
TCACATCCAA AGGATCCAAA GGTTCCAAAG TCTTCGAAGT CTTCTGACGA TCACAAGACA
GTTCAACGAG GCGACGTCAT CTCCAAATAT GTTGGAAAAA GCAAGTTGAT AGTGTTTCCT
AAAGCATTCG AAGAGTCAGA TCTGAAGAAG CTATACAAAC TCTATACATC ACAGTTCAAA
GAACTGCCTC CGCGACGGAG CAAGATAATT AGATTTCTGG ATCCCTCGCA AAAGACTGAT
CCTCTCAGTA ACTCCATAAA GAATTTGAAG TATCACAAGC ATCCCGTCCA GCTGTTTAAT
GCGTTTACTG ATATAGAAGG AAATATGGAA AAATGTGGAT TGCTCGAAGA TAAGTACGAA
ATTGAAGTGC TGAAAAGCTT AATGAAAAGC AAGTCTTTGA AAAAGATTGT ACAGAAGTGG
GTCAATGAAA ACTCCACATA CTTCCAGGAA ATAAATGAGT TCTTCCACAC TCCTCTCCAG
CAGCAACTCA AAGAAGGTAG TGTTGATCTG CATTGGTTTA GATTGGCGGG ATCATCAGTA
TGGTTAGAAC AATATGGAAT CCATTTCATG GTCTCAAGAA TTATATATGC CGAAAACAAA
GATAGGGGAA CGCCAAACTT ATCTATGATC TACGCTCAAG CTTATGATGA AAACTGGAAA
GAAGTAGAAA ACTTAGAGTT GGTGGTTCCT ACAAATAACC CAAACCTATA CCTTGAATCC
AATGATCCCC CTCAATTTAG ATTGCAATTG CCTCAAATCT TACCTATACC AATTCACCTT
GATAAAGAAC GTCAATGGCC CGGATTTTAT GGTGCTGAAG ATCCTCGAAT TATCGCTGTG
AAAAACGCAA GAGGTTTCGA GGAACCTTTG GTTTTCTACA ACTCCTACCA TGGAAAAGTT
GTGAACATTG AGGAAATCGA TGAAGGTAAG TCAACTGCAC ACCTACTATT CTCCAGAAAT
ATGTTCATGG CTTGGCCATT CCAGACTCAA AGAGGGAAAT ACAACGTTCA AGACTTGCCC
TCGAAATACC ACAACAACAT ATTCACAAGA GTGTTGGAAA TAAAAGAAGC AAATAAAGAA
AGAGAAGGAA AACAAAAGAA CTGGACCCCA TTCATTAGCA GCCAGGATAG GAAGAGTTTC
GGATATGACA AGTACATCTA TATGAGTATT AGGATTGAAC ATTTGCAAAT TTTGCGGTGT
CCAGTAGTAG GTGGGAGCGA CCAATTCGTG ACTGAATGTG AGGAGGTTTA TCTATTAAAC
CCAGAGAAGT CCAACAACGA CGGAATCGGC CCATTGAGGG GTGGATCACA ATTTGTAAAC
ATTAACAACA TGCTTGAGTC ATATTCCGAG CTTCCAGAAG CTAGGAAGCT TATAGATAGC
ATTCCAAAAG GAAGGGAACT TTGGTTTTCT TTCGCCAGAG CAAATCTAGA ATATTGCGGC
TGTGGTGTAA AGATGTATAG ACCTAATTTG GTTGTGGTGG TTAAGGATGG CGATCAGTAC
AAGATTAGTT ATGTCAGTTC CTTCGTTGAT TTAGCGGTCG AGCAGCTTGG CTGGATTTTG
AAGGAGTCTG ATAACTATTG TCCAGAGAAT GATGGTTCAG TTATGATTCC TAATGGTATT
GCGTCTTGGA CCCTTCGAGA AAATGGTGAA AAGACAAACA TTGATGACTA CATGACGTTG
AGTTATTCAC TTGCAGATGC TACAGTTGAA ATTATTCACA TCAGAGGGGT TCTTAAAGCA
CTTCTTGGTC TTGACTCCAA AAATCAAAAC TACAAGCTCT TCGAGAAGTC AAGTGCGCTC
GATGCTAAGA CTGTGGGTTA CAACAATGAC AATATAGATT GTGCTTTAGA GAATTCTAAG
CAGTACTGTC AGGCATTTGG AGAAAAGGAA AAGAAGAAGA TGGAGCTGAG AGTGAAGCCT
CAAGATAAAG AAGAAAACAA ACAAAGACAA GATGGAAAGG AATCCGAAAC ACAGGAACCG
AAAGAGTGA
 
Protein sequence
MFRRQGRSFV LVLALLAILV TLHLFFWDDK LDIRSKVFKQ KNSGQVPTNK AEVPPKPGSK 
SHPKDPKVPK SSKSSDDHKT VQRGDVISKY VGKSKLIVFP KAFEESDSKK LYKLYTSQFK
ESPPRRSKII RFSDPSQKTD PLSNSIKNLK YHKHPVQSFN AFTDIEGNME KCGLLEDKYE
IEVSKSLMKS KSLKKIVQKW VNENSTYFQE INEFFHTPLQ QQLKEGSVDS HWFRLAGSSV
WLEQYGIHFM VSRIIYAENK DRGTPNLSMI YAQAYDENWK EVENLELVVP TNNPNLYLES
NDPPQFRLQL PQILPIPIHL DKERQWPGFY GAEDPRIIAV KNARGFEEPL VFYNSYHGKV
VNIEEIDEGK STAHLLFSRN MFMAWPFQTQ RGKYNVQDLP SKYHNNIFTR VLEIKEANKE
REGKQKNWTP FISSQDRKSF GYDKYIYMSI RIEHLQILRC PVVGGSDQFV TECEEVYLLN
PEKSNNDGIG PLRGGSQFVN INNMLESYSE LPEARKLIDS IPKGRELWFS FARANLEYCG
CGVKMYRPNL VVVVKDGDQY KISYVSSFVD LAVEQLGWIL KESDNYCPEN DGSVMIPNGI
ASWTLRENGE KTNIDDYMTL SYSLADATVE IIHIRGVLKA LLGLDSKNQN YKLFEKSSAL
DAKTVGYNND NIDCALENSK QYCQAFGEKE KKKMESRVKP QDKEENKQRQ DGKESETQEP
KE