| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32232 |
|---|
| Symbol | FIP1 |
|---|
| ID | 4839177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | - |
|---|
| Start bp | 1002366 |
|---|
| End bp | 1003217 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640390492 |
|---|
| Product | component of a pre-mRNA polyadenylation factor |
|---|
| Protein accession | XP_001385203 |
|---|
| Protein GI | 150865827 |
|---|
| COG category | [A] RNA processing and modification |
|---|
| COG ID | [COG5213] Polyadenylation factor I complex, subunit FIP1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACC ATTCAGATGA CGAGGATGCC TATCTCTATG GATCCGACGA CGAGGCCGGT
GTAAAATCTG TAGGAAAAAA TGAATCCAAC ACGAAGAGTG TATCTTTACC AAATGCCAGA
AGTGAGAAAG AAGTAGAAGA AGTTGAAGAA GAAGATGATG ATGACGAGGA AGAAGAAGAA
GAAGATTCTG ACGACGATAT AGATATCATA ATAGGTGATT CACCACCTAA AACGGCCACA
GTCGTTACTT CTGCTCAGAC AGAAACTACA GCATCCGAAG AAAAGTCATC TACTACAACA
ATAGTAGCCA GTCAGCTGGG GGAGCCTGGC ACAACGGTGG ACGTGAATAC CATGGCAGAA
TACGAGGGAA AGCCACTAAC GCAATTAGAC TTGGAAACAC TTAAAGATAA GCCATGGAGA
GCTCCTGGAG CTGATATTTC CGATTACTTC AATTATGGTT TTGATGAATT CACGTGGATA
GCATATTGCC ACAAGCAAGA CAAGACGAGA GGCGAATTTA ATCCTCAAGC TGTCATGGCT
AAATTGATGG GAGGATCTGC TCCACCCATG CCACCTGCTG GAGCTGGTCC TGGTGGTCCT
CCAGGTATGC CTCCTATGGG AATGATGCCA CCGGGAATGC CTCCTATGGG TATGATGCCT
CCAGGCATGC CCAATATGCC ACCTGGAATG GGTATGCCTG GAATGCCTGG AATGCCAGGC
ATGCCTAACA TGCCCAACAT GCCCAACATG CCTAATATGC CCAACATGCC CAATTTCATG
AATAATGCCA ATAATAATAA TAGTAATAAT GGTAATAGGC AATATCAGAA TTTCATTCCG
AACAGGCAAT GA
|
|---|
| Protein sequence | MADHSDDEDA YLYGSDDEAG VKSVGKNESN TKSVSLPNAR SEKEVEEVEE EDDDDEEEEE
EDSDDDIDII IGDSPPKTAT VVTSAQTETT ASEEKSSTTT IVASQSGEPG TTVDVNTMAE
YEGKPLTQLD LETLKDKPWR APGADISDYF NYGFDEFTWI AYCHKQDKTR GEFNPQAVMA
KLMGGSAPPM PPAGAGPGGP PGMPPMGMMP PGMPPMGMMP PGMPNMPPGM GMPGMPGMPG
MPNMPNMPNM PNMPNMPNFM NNANNNNSNN GNRQYQNFIP NRQ
|
|---|
| |