Gene PICST_32218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32218 
Symbol 
ID4839319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp966002 
End bp966490 
Gene Length489 bp 
Protein Length162 aa 
Translation table12 
GC content50% 
IMG OID640390634 
Productpredicted protein 
Protein accessionXP_001385196 
Protein GI150865824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.495303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.150728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTTG CAGCCTTGTT TCTCGTGCTC CAGACGGCCA TGGCCATGGT TATACGTGGA 
GTGGACACTG AGGTCAGAGC CGTTTGGTTG AATGTGACTC ATCCCTATCT CAAACAGAGG
TTTCCTTCTG TAGTGACTAC GGTAGGATAT ACTTTTGATA ACTACGACGA GCTAGTGGCT
CTAGCAGACC ATGCTGCGGT TTCGAGCGAG AAGGAGCTCT GGGGCGACTT CTTGGGCGAC
TACGTCAGCT TCAAATACGG TGGCTACCTC ACGACTTCAT TCGACTACAA GCGTGAAGAC
GTCAAGCTGT ATGTCATAGA CCTTATGGAG GGCGATGTCT CGTACTTTCC GGGGAACCGG
CTAGACGAAG TGTTGGAGAC TACAACGATC GAAAACTATA AGATCTTGTA CCACAGTATC
AATCGCTACG GAAAATGGAC CGGGCAGATC TGGAGACTGG TCTCTAGAGC CATTTTTGGC
GCATACTAG
 
Protein sequence
MLFAALFLVL QTAMAMVIRG VDTEVRAVWL NVTHPYLKQR FPSVVTTVGY TFDNYDELVA 
LADHAAVSSE KELWGDFLGD YVSFKYGGYL TTSFDYKRED VKSYVIDLME GDVSYFPGNR
LDEVLETTTI ENYKILYHSI NRYGKWTGQI WRSVSRAIFG AY