| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32210 |
|---|
| Symbol | PLS1 |
|---|
| ID | 4839590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | + |
|---|
| Start bp | 952463 |
|---|
| End bp | 953518 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640390905 |
|---|
| Product | phospholipid scramblase 1 |
|---|
| Protein accession | XP_001384852 |
|---|
| Protein GI | 150865579 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0648042 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTAT TACGTACTAC TTTGCGAGGT GTCCATTTGA GGTCACCAGC GGCTTTTTCT
TCTTCCATTT TTATAAGAAG TTTCGGGACG TCTTCACTTT TGAAATTTCC TAGAAAGACT
AGAATCACGC AGGAGATCTC AGCAGAAGAA GTCAAACGAT ATGAAGAACA GCAACATCAA
CAAGGAAATA ATGCTAAGGA CTTTTACTAC CGAACGAACC CTCTGCTGGA TGCTGGAGAG
TACAGAAATG AACCTTCACT GTTCCATACT ATATTCAATA TTCCACCCAA TGAGAATGGG
TTGATTACCC CTGAAGATGG CATTTATGAT ATCTTGAAAG AGCCTACTTT GGTTATTGAG
AGACAGATCG AGATAGCGAA TGTCATTTTA GGCTTTGAAC AGGCCAACCG GTACAAGATC
ATGAACTCCA CGGGAGAACA AATAGGGTAT ATGCAAGAGA AAGATTTGGG AATATTGAAA
GTAATAGGTA GACAGTTCTT CAGGTTGCAT CGGCCATTTG ATATTGACGT CTTTAATAAC
TATGGTGACT TGTTATTGAC GATTAAAAGA CCTTTTTCGT TCATCAATTC TCACATCAAG
TGTTTTCTTC CAGGATACGA TACTGATAAC AGTCTCATTT TCGAGAAAAT CGGTGAGTCT
ATCCAGTCGT GGCACTTATG GAGAAGAAGA TACAACTTGT TTAAGTTAGA AGACGAAGTA
ACGGATGATT TCAACCAGTT CGGGGCTATT GACGCACCTT TCCTCTCGTT TGATTTCCCT
GTGAAAAACC AAAACGGTGA TGTCATAGCC TCTGTAGATC GTAACTGGGT AGGGTTAGGC
AGAGAACTAT TCACTGATAC TGGTGTTTAT ATCGTGCGAA TGGATCCTGC TTCCTTTGCA
GGAATGGGTG AGTTGTATCC TACTGTAGCT GGACCCTTGA CCCTTGACCA AAGAGCTATA
TTGCTAGGAA ATGCTGTCAG TATAGATTTC GACTACTTTT CAAGACACAG CCGTGGACCA
GGAGGAGGTT TCTTATCATT TGGAGGAGGA GAATAA
|
|---|
| Protein sequence | MSLLRTTLRG VHLRSPAAFS SSIFIRSFGT SSLLKFPRKT RITQEISAEE VKRYEEQQHQ
QGNNAKDFYY RTNPSSDAGE YRNEPSSFHT IFNIPPNENG LITPEDGIYD ILKEPTLVIE
RQIEIANVIL GFEQANRYKI MNSTGEQIGY MQEKDLGILK VIGRQFFRLH RPFDIDVFNN
YGDLLLTIKR PFSFINSHIK CFLPGYDTDN SLIFEKIGES IQSWHLWRRR YNLFKLEDEV
TDDFNQFGAI DAPFLSFDFP VKNQNGDVIA SVDRNWVGLG RELFTDTGVY IVRMDPASFA
GMGELYPTVA GPLTLDQRAI LLGNAVSIDF DYFSRHSRGP GGGFLSFGGG E
|
|---|
| |