Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32181 |
Symbol | |
ID | 4839699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 877677 |
End bp | 878504 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640391014 |
Product | predicted protein |
Protein accession | XP_001385177 |
Protein GI | 150865808 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0219438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAC GAGCTCATCC TGATACCGAC TATTCAAGTG ATGATGGTGG GAATACACCC TTCTATCTCA ACTCTACTAT CCCTATACCA CCCCCAAGTG CAGCCGAGAA CACCACCATG GAGAGCTTTG CCAAAGAAGC CTCGCCGGAA AGTCCTAATG ATGTGAAGAG TTGGGCCAAA CTTATACTGT TGGAATCTGC CACTCTCAAG GAAACTTTGG ACAATGTCGT GGTACCTTCA TTGAATACTC TATTGGAGAA GTCGACTCAT AACTTCCGTT CAGTCCAGCT GCGCATCCTG ATTCTTGCGA GCAATATTAA GGGCATTCAC AACGACGAAG AAAGTACAAG AAGAGCTTTG GAAAAAGTGG AGAAAATGGT ACAGTGGTTG CTTGAGCATC CGAATCATGG CTTAGACTAT AGAAATTATG AGGGCAATAA TGACGGTACT ATTACTACGA AGGCTACAGA AAACGTCAAC TTTATAGATT TGGAAAAAAG ATTGCAAATT ATTGAAAACA CTGTCAATAT GGAAAAGAGA GAACCACTTT CGAAAAGTTC CCTTTATCCA GGCTACTCCA AGACAGGCAC AGTATTGGCG TATTCCGAAG GGAGTCCAAC AGGTACAGGC ACAAATGGTG CAAGTATTAT TAATAGTCAC ATTAATACAA TTGAGCTTAA AGAGCAGATT TCATTAATGC AGATGAAGAT TCAGAAATTA GAAGACCAAC TAGCTCAGTT TGTTTCCAGA GTTGAGTCAC AGCCACAGCC AGCAGAAAGT GCCAGCTCCA ATGTGACACA CATTTCTCAA AACGACAGGA TCTCTTAA
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Protein sequence | MSKRAHPDTD YSSDDGGNTP FYLNSTIPIP PPSAAENTTM ESFAKEASPE SPNDVKSWAK LISLESATLK ETLDNVVVPS LNTLLEKSTH NFRSVQSRIS ILASNIKGIH NDEESTRRAL EKVEKMVQWL LEHPNHGLDY RNYEGNNDGT ITTKATENVN FIDLEKRLQI IENTVNMEKR EPLSKSSLYP GYSKTGTVLA YSEGSPTGTG TNGASIINSH INTIELKEQI SLMQMKIQKL EDQLAQFVSR VESQPQPAES ASSNVTHISQ NDRIS
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