Gene PICST_32181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32181 
Symbol 
ID4839699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp877677 
End bp878504 
Gene Length828 bp 
Protein Length275 aa 
Translation table12 
GC content42% 
IMG OID640391014 
Productpredicted protein 
Protein accessionXP_001385177 
Protein GI150865808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0219438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAC GAGCTCATCC TGATACCGAC TATTCAAGTG ATGATGGTGG GAATACACCC 
TTCTATCTCA ACTCTACTAT CCCTATACCA CCCCCAAGTG CAGCCGAGAA CACCACCATG
GAGAGCTTTG CCAAAGAAGC CTCGCCGGAA AGTCCTAATG ATGTGAAGAG TTGGGCCAAA
CTTATACTGT TGGAATCTGC CACTCTCAAG GAAACTTTGG ACAATGTCGT GGTACCTTCA
TTGAATACTC TATTGGAGAA GTCGACTCAT AACTTCCGTT CAGTCCAGCT GCGCATCCTG
ATTCTTGCGA GCAATATTAA GGGCATTCAC AACGACGAAG AAAGTACAAG AAGAGCTTTG
GAAAAAGTGG AGAAAATGGT ACAGTGGTTG CTTGAGCATC CGAATCATGG CTTAGACTAT
AGAAATTATG AGGGCAATAA TGACGGTACT ATTACTACGA AGGCTACAGA AAACGTCAAC
TTTATAGATT TGGAAAAAAG ATTGCAAATT ATTGAAAACA CTGTCAATAT GGAAAAGAGA
GAACCACTTT CGAAAAGTTC CCTTTATCCA GGCTACTCCA AGACAGGCAC AGTATTGGCG
TATTCCGAAG GGAGTCCAAC AGGTACAGGC ACAAATGGTG CAAGTATTAT TAATAGTCAC
ATTAATACAA TTGAGCTTAA AGAGCAGATT TCATTAATGC AGATGAAGAT TCAGAAATTA
GAAGACCAAC TAGCTCAGTT TGTTTCCAGA GTTGAGTCAC AGCCACAGCC AGCAGAAAGT
GCCAGCTCCA ATGTGACACA CATTTCTCAA AACGACAGGA TCTCTTAA
 
Protein sequence
MSKRAHPDTD YSSDDGGNTP FYLNSTIPIP PPSAAENTTM ESFAKEASPE SPNDVKSWAK 
LISLESATLK ETLDNVVVPS LNTLLEKSTH NFRSVQSRIS ILASNIKGIH NDEESTRRAL
EKVEKMVQWL LEHPNHGLDY RNYEGNNDGT ITTKATENVN FIDLEKRLQI IENTVNMEKR
EPLSKSSLYP GYSKTGTVLA YSEGSPTGTG TNGASIINSH INTIELKEQI SLMQMKIQKL
EDQLAQFVSR VESQPQPAES ASSNVTHISQ NDRIS