| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32180 |
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| Symbol | GAP1.1 |
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| ID | 4839454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 875498 |
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| End bp | 877162 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390769 |
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| Product | general amino acid permease |
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| Protein accession | XP_001385176 |
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| Protein GI | 126137305 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | [TIGR00913] amino acid permease (yeast) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.279338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0497012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGTTT CTTTCAAAGA TTCGTTCAAG CGGGCTGAAC AGACTGAAAC TTTGACTGCT
GCAGACTATG ATGAAGAGAA AGAGTTGACC AATATAGAAA GGATAAACAT AAACGCAGCC
AATTCTACAC TTAAAAGAAA ATTGAAGTCT AGACATTTAG AAATGATTGC CATTGGCTCT
TCTATAGGGA CTGGTTTATT TGTAGGTTGT GGAGGTGCAT TGAGAACTGG TGGTCCAGCT
GGTCTCATCA TTGGTTGGCT AGTTACAGCT ACTGGGGTAT TTGCTACAAT GCAAGGATTA
GGTGAATTGT CAGTAACTTT CCCTGTCAGT GGTGGTTTCA ATTTGTTCGC AAGTCGTTTC
ATAGAGCCTG CGGTAGGGTT TGCTATTGGC TGGAATTACT TCATGCAATT TTTCGTATTG
CTCCCCTTAG AGCTTGTTGC TGCTTCGATA ACAATCAAGT ACTGGAATGA TGATATCAAC
TCAGATGTGT TTGTCATCAT CTTTTGGTTA TTTATAGTGT TCCTCACTTT GTTGGGTGTC
AAGGCATATG GAGAAGCAGA ATTCTATTTC TCGCTTATCA AGGTATTAGC AGTTATTGGA
TTCATTATAA TGAGCATTGT GTTGGTTTGT GGAGGCGGTC CTACTCACGA GTTTGTTGGA
GGTGTCAACT GGCGAACACC TGGGCCGTTT GCCAATGGTT TCAAAGGAGT AGTTTCAACA
CTTGTTACTG CAGCTTTCAG TTATGGAGGC ACTGAGATGA TTGGTCTTAC AGCTGCTGAG
ACTGAAAACC CTCGCAAGAC TCTTCCAAGA GCTATCAAGC AAGTTTTCTG GAGAATCTGT
TTGTTTTACT TAGGCTCCTT GACCATGGTT GCAACTTTGG TCAATTACAC AGACAACAGA
TTGATCGGGT CATCTTCTGT AGATGCAACT GCTTCTCCAT TTGTGATTGC CATTGTCAAT
GGAGGTATAA AGGGTTTACC AAGCGTCTTG AACGCTGTAA TTTTGATTGC CGTTTTATCA
GTTGGAAACG CTTCTGTATA TGCTACATCC AGATCCTTGA ACTCGCTTGC TGAACAAGGA
ATGGCTCCAA AATGGACCGG ATATGTCGAT AGAGCAGGAA GACCTTTGGT GGCTATTTTG
ATAACCGATG CTTTCGGACT TTTTGCTTTG ATTGCAGCTA GCAACAAACA AGTAGATGTG
TTCAACTGGT TGCTTGCTTT ATCTGGACTC AGTTCTATCT TCACTTGGTT AGCCATTAAT
GTCAGTCATA TCAGATTTAG AGCTGCCATG AGAGCTAAAA ACAGATCTTT GGGAGAACTT
GCCTACGTTT CTCAATGTGG AGTCTGGGGT TCTTACTACG GTGCCATATT GAATTCACTA
GTTTTAGTTG CTCAATTTTG GATAGCTATT TTTCCACTTG GAGGAAAGCC CAATGCTAGT
GACTTCTTCT TGTCCTACTT AGGATTTCCA GTTCTTTTGG CTTCCTGGCT CTTCTACAAG
GTATGGAAGA AGGATTGGAC CCTCTTTATC CGTGCCAAAG ATATCGATGT AGATACTGGC
AGAGCCAACA TAGACTTGGA TGTCTTGCAA CAGACTATCG CTGAAGAAAA ATCACAGCTT
TCTGAAAAAC CTTTCTACGT GCGGTGGTAT AAGTTCTGGT GTTGA
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| Protein sequence | MWVSFKDSFK RAEQTETLTA ADYDEEKELT NIERININAA NSTLKRKLKS RHLEMIAIGS
SIGTGLFVGC GGALRTGGPA GLIIGWLVTA TGVFATMQGL GELSVTFPVS GGFNLFASRF
IEPAVGFAIG WNYFMQFFVL LPLELVAASI TIKYWNDDIN SDVFVIIFWL FIVFLTLLGV
KAYGEAEFYF SLIKVLAVIG FIIMSIVLVC GGGPTHEFVG GVNWRTPGPF ANGFKGVVST
LVTAAFSYGG TEMIGLTAAE TENPRKTLPR AIKQVFWRIC LFYLGSLTMV ATLVNYTDNR
LIGSSSVDAT ASPFVIAIVN GGIKGLPSVL NAVILIAVLS VGNASVYATS RSLNSLAEQG
MAPKWTGYVD RAGRPLVAIL ITDAFGLFAL IAASNKQVDV FNWLLALSGL SSIFTWLAIN
VSHIRFRAAM RAKNRSLGEL AYVSQCGVWG SYYGAILNSL VLVAQFWIAI FPLGGKPNAS
DFFLSYLGFP VLLASWLFYK VWKKDWTLFI RAKDIDVDTG RANIDLDVLQ QTIAEEKSQL
SEKPFYVRWY KFWC
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