Gene PICST_32162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32162 
Symbol 
ID4839426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp830329 
End bp831207 
Gene Length879 bp 
Protein Length292 aa 
Translation table12 
GC content39% 
IMG OID640390741 
Productpredicted protein 
Protein accessionXP_001384828 
Protein GI150865561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.520141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATT CAGCTCCACT AGCACGATTG GCTATGTTCC ATTCACATTT GAAGAATAGA 
GACGTTTCGC AGTTGAATCC GGAGTTTCCG TATTTACCGA AACACGAAAG GAAACAGTAT
GAGAAATTCC ATCTCTTTAC TTGTAGATTG AAGCCAGCGG AGACAAATGT GAACACCATT
AGTGTTCCCA AAGAGAAACA TGATGAAAGT AGAACAACAA GCAACATAGA AAAGAAGAGA
TATAAGCTGT TTGTTCCAGG AGGTTTTGAG TCCGTGCAAT TAGCCATTCC CCAAGAAGAC
GCAAAAATTC ACAGTAAAGT CGTGACATTG GTGAGACAGC TTATCCATAA AACCGATGAA
GGTGGCCAGG AGTTGATAAC CACAGAATCT GGTTGGCTAG TATTAAATCA ACTATTGCAA
CTAGATGATT CAGAAGATTC AGAAGAATAC AAAAGCATTT TATACGTTAG TGACAAAGAA
GAAGAACTTT TTGCGGATGG AATAGAGAAT AAGATTCACA AAATAAAAAG TTCTCAGGTG
GCAGAACATG ATGTGCACGA GAGAAAGTAC AGGGCTGTCG TTATAGACGA AGATTTAGAC
GACGTGGAGC AATTAATATC AAAAATTAAG ACACACAACA AAGACTCAAT GTTGGTTCTA
AAGTGTGATC TCGACAGTGA GAGTTCTATT GAGTTCGACA AATGGCATAT TGATTATTTA
TTTGCATCGT GTGGAGAGGC AAGCATTCTT GTTCTCTCAG AACGATTCAC AGACAGTGTT
GAGTGGACAG ACCCCTTGAA CGAGGAACTT CAAGATCAAG AATTGGATAT TTCAGATGTA
TATGACAAGC TAACAGCCGC GAAAGAGGTA TTACTTTGA
 
Protein sequence
MSDSAPLARL AMFHSHLKNR DVSQLNPEFP YLPKHERKQY EKFHLFTCRL KPAETNVNTI 
SVPKEKHDES RTTSNIEKKR YKSFVPGGFE SVQLAIPQED AKIHSKVVTL VRQLIHKTDE
GGQELITTES GWLVLNQLLQ LDDSEDSEEY KSILYVSDKE EELFADGIEN KIHKIKSSQV
AEHDVHERKY RAVVIDEDLD DVEQLISKIK THNKDSMLVL KCDLDSESSI EFDKWHIDYL
FASCGEASIL VLSERFTDSV EWTDPLNEEL QDQELDISDV YDKLTAAKEV LL