Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32162 |
Symbol | |
ID | 4839426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 830329 |
End bp | 831207 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640390741 |
Product | predicted protein |
Protein accession | XP_001384828 |
Protein GI | 150865561 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.520141 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATT CAGCTCCACT AGCACGATTG GCTATGTTCC ATTCACATTT GAAGAATAGA GACGTTTCGC AGTTGAATCC GGAGTTTCCG TATTTACCGA AACACGAAAG GAAACAGTAT GAGAAATTCC ATCTCTTTAC TTGTAGATTG AAGCCAGCGG AGACAAATGT GAACACCATT AGTGTTCCCA AAGAGAAACA TGATGAAAGT AGAACAACAA GCAACATAGA AAAGAAGAGA TATAAGCTGT TTGTTCCAGG AGGTTTTGAG TCCGTGCAAT TAGCCATTCC CCAAGAAGAC GCAAAAATTC ACAGTAAAGT CGTGACATTG GTGAGACAGC TTATCCATAA AACCGATGAA GGTGGCCAGG AGTTGATAAC CACAGAATCT GGTTGGCTAG TATTAAATCA ACTATTGCAA CTAGATGATT CAGAAGATTC AGAAGAATAC AAAAGCATTT TATACGTTAG TGACAAAGAA GAAGAACTTT TTGCGGATGG AATAGAGAAT AAGATTCACA AAATAAAAAG TTCTCAGGTG GCAGAACATG ATGTGCACGA GAGAAAGTAC AGGGCTGTCG TTATAGACGA AGATTTAGAC GACGTGGAGC AATTAATATC AAAAATTAAG ACACACAACA AAGACTCAAT GTTGGTTCTA AAGTGTGATC TCGACAGTGA GAGTTCTATT GAGTTCGACA AATGGCATAT TGATTATTTA TTTGCATCGT GTGGAGAGGC AAGCATTCTT GTTCTCTCAG AACGATTCAC AGACAGTGTT GAGTGGACAG ACCCCTTGAA CGAGGAACTT CAAGATCAAG AATTGGATAT TTCAGATGTA TATGACAAGC TAACAGCCGC GAAAGAGGTA TTACTTTGA
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Protein sequence | MSDSAPLARL AMFHSHLKNR DVSQLNPEFP YLPKHERKQY EKFHLFTCRL KPAETNVNTI SVPKEKHDES RTTSNIEKKR YKSFVPGGFE SVQLAIPQED AKIHSKVVTL VRQLIHKTDE GGQELITTES GWLVLNQLLQ LDDSEDSEEY KSILYVSDKE EELFADGIEN KIHKIKSSQV AEHDVHERKY RAVVIDEDLD DVEQLISKIK THNKDSMLVL KCDLDSESSI EFDKWHIDYL FASCGEASIL VLSERFTDSV EWTDPLNEEL QDQELDISDV YDKLTAAKEV LL
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