| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32155 |
|---|
| Symbol | |
|---|
| ID | 4839421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | + |
|---|
| Start bp | 818472 |
|---|
| End bp | 819107 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640390736 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384823 |
|---|
| Protein GI | 150865556 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00298421 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.251125 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCAG AATCCAAGCT CATTCGTCTA TTCGAAGATT TAGATTTTGC TGCTGAACCA
GATATGTTCG AAAGCAACAA GGAAAATGAA ATAGTCCAGG ATCATTATGG TTCACCCATC
AAGAGAAAGC CTCTCATAGA AAAGTACAAG ACTATGGGAG ATGTGCCAAA AGTCAAGAAA
TGGAACCTAC GCAGTCTGGA TGTGGAGCCG CTGTCCAGCG CAACTACAGA AAAGAAGAAT
GAAGAGGATG ATAAACATAC GGACTCTTCT GTTATTGACC ATACCATCAG AGAGCTTCAT
GAAGTGTACC AAGCTACAGA GTCCGCTACT TCTCCCATCG AGACGATAGC ACAATTGGAG
AAGCTCAGGC AGTATTGCTC CATGACCACA ATGGCCATAC CCAGTGTCAG ACTCGAGTCC
ACAGATAGGA TAGAAGTCAA CTACTGTAAA CTCTTGTTGG CATACAGCAA GCTAGCCAGA
GTTCTCACCA ATAAGAACCA CGAAGTCATT CTTGCCAACT TCAAGCAGAA CTTGCTTATC
AACACTCTAA TCGGCTCGTT GCAGCTGCTG ATTGAAAGCG AAGCTGCTGA AGCTAATCAT
TTCGAAGATA CTACATTTGA GTCAGAGAGT TTTTGA
|
|---|
| Protein sequence | MNAESKLIRL FEDLDFAAEP DMFESNKENE IVQDHYGSPI KRKPLIEKYK TMGDVPKVKK
WNLRSSDVEP SSSATTEKKN EEDDKHTDSS VIDHTIRELH EVYQATESAT SPIETIAQLE
KLRQYCSMTT MAIPSVRLES TDRIEVNYCK LLLAYSKLAR VLTNKNHEVI LANFKQNLLI
NTLIGSLQSS IESEAAEANH FEDTTFESES F
|
|---|
| |