| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32146 |
|---|
| Symbol | ALD1 |
|---|
| ID | 4839107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | + |
|---|
| Start bp | 802922 |
|---|
| End bp | 803818 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640390422 |
|---|
| Product | aldolase |
|---|
| Protein accession | XP_001384816 |
|---|
| Protein GI | 150865551 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.943174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCAT CTACAGAAAC TACTACAGCC TCCTCGACTG CCTCGGCTAC TTTGCAAGTC
CAATCTGAGA CGAACAAGGG ATACAAAGTT TCAGAAAGAG GATCACACAA CATCGCCAAA
GGTGCCGCTC ATCCTTACCA GTTGCCCAAG TTCACGGATA AGGTGGCAGA GAGAAAATGG
GCACTTCAAC ATATGGCAGG CGCCTTCAGA GTGTTTGCTA GAAAAGGGTA TACCGAAGGC
ACAGCTGGTC ACATCTCCAT TAGAGACCCT ATTGATCCTG ATACATTTTG GATCAACCCA
TTGGCCAAGC ATTTTGGCTT GCTCAAAGCC AGCGATATGG TCCATGTAGA TGAAGAGGGC
AATATTTTGC CAGATGGTGC CCAGACAGCG ATTAATGCTG CTGGATTTGC TATCCATTCA
GCTTTACACA TTGCTAGACC AGACGTAAAT GCTGCATGTC ATACTCATTC TGTATACGGA
AAGGCATGGT CGGCCTTTGG CAAGCCTTTA GACATGTTGA ACCAAGATGT TTGCACTTTC
TACAAGACGC ATAGTGTATA CGAAGACTTT GGTGGAGTTG CTCTTGAAGC TGAAGAAGGA
AGACAGATCG CAAAAGCTAT TGGAAACGGG AAGGCTGCTA TTCTACAGAG CCACGGGTTG
TTGACTGTAG GACAGACCGT AGACGAAGCT GCTTATCTTT TCACGCTTAT GGAAAGGTCC
TGCGAAGTTC AATTGCTTGC AAAAGCAGCC TTACGTCCGG GTGAAGAGTT GAAGATCATC
CCTGACGCAG AAGCGGCCTA TACCGAGCAC CAGGCAGGTG ATCTGGAAAC GTTGTACACT
GAGTTTCAGC CTGATTACGA GATGGAAGTC TACTTAAATG ATGACTTTCT TAATTAG
|
|---|
| Protein sequence | MIPSTETTTA SSTASATLQV QSETNKGYKV SERGSHNIAK GAAHPYQLPK FTDKVAERKW
ALQHMAGAFR VFARKGYTEG TAGHISIRDP IDPDTFWINP LAKHFGLLKA SDMVHVDEEG
NILPDGAQTA INAAGFAIHS ALHIARPDVN AACHTHSVYG KAWSAFGKPL DMLNQDVCTF
YKTHSVYEDF GGVALEAEEG RQIAKAIGNG KAAILQSHGL LTVGQTVDEA AYLFTLMERS
CEVQLLAKAA LRPGEELKII PDAEAAYTEH QAGDSETLYT EFQPDYEMEV YLNDDFLN
|
|---|
| |