Gene PICST_32142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32142 
Symbol 
ID4839224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp792958 
End bp793707 
Gene Length750 bp 
Protein Length249 aa 
Translation table12 
GC content40% 
IMG OID640390539 
Productpredicted protein 
Protein accessionXP_001385161 
Protein GI126137275 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.552303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGTTA GAAAGCCGAA AAGAACACAC AAAGACGTAG ATGAGGATAT ACGACGGTAC 
AAGGAGCTTC TCAAACGTGA TATTGGAACA GATATACCTC CCAAAAGGTG TAGAGTCAAA
GTTGAGTATG AGCCTGAAGT TGAAATAAAG AGAGAGGAGC CAGAGCCAAA GGCAGTAATT
GCGTTCCGAC AGACGAGATC AGTAACTCGA AGAATGGCAG AGAATCCGCC AATGCCCAGA
GTGTCGAAAC CAGTGGAAAC AGAACCACGA CAAATCACGA GACCACTATT TAAGAGCATA
GGAAACAAGA GTCATAAGAA AGGTAATAAA GAAAATCAGA AAAACATAGC AGAAAGTCAG
AAGGTTCAGA ATAAAAACAA AAATCTTACT GTTCCAATTC CACTTGAGAA TATAACAAAA
TTCGCGAAAT TGGAAGATAA AGTCAGTTTC GACAACAGCT ATGCTGGCAT GATAAAGCTT
GTAAATGACA ATTTGGATCG GGATCCTAGA AAAAGTACCA TCGATATAGC ATTGCACCAC
CGGTTGATTT CGAAGAATTT GGTAGCTGAG AAAGAGAAAT TAGAGTTGAA ACCTGATTGT
TACAGCGATT TCTATCACAA AAATGCTTTG AATGTGACGA GCTTCTTCAA CAGTAGTGAT
ATTGACTCGT TCTTTGAAGC TTTGAGTGGA TTCGAGAGCC AACGTGAGTT GATTCGTGAC
AAGCTTAAGA GAGAAATTCC ATTAGTGTAA
 
Protein sequence
MVVRKPKRTH KDVDEDIRRY KELLKRDIGT DIPPKRCRVK VEYEPEVEIK REEPEPKAVI 
AFRQTRSVTR RMAENPPMPR VSKPVETEPR QITRPLFKSI GNKSHKKGNK ENQKNIAESQ
KVQNKNKNLT VPIPLENITK FAKLEDKVSF DNSYAGMIKL VNDNLDRDPR KSTIDIALHH
RLISKNLVAE KEKLELKPDC YSDFYHKNAL NVTSFFNSSD IDSFFEALSG FESQRELIRD
KLKREIPLV