Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32142 |
Symbol | |
ID | 4839224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 792958 |
End bp | 793707 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640390539 |
Product | predicted protein |
Protein accession | XP_001385161 |
Protein GI | 126137275 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.552303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGTTA GAAAGCCGAA AAGAACACAC AAAGACGTAG ATGAGGATAT ACGACGGTAC AAGGAGCTTC TCAAACGTGA TATTGGAACA GATATACCTC CCAAAAGGTG TAGAGTCAAA GTTGAGTATG AGCCTGAAGT TGAAATAAAG AGAGAGGAGC CAGAGCCAAA GGCAGTAATT GCGTTCCGAC AGACGAGATC AGTAACTCGA AGAATGGCAG AGAATCCGCC AATGCCCAGA GTGTCGAAAC CAGTGGAAAC AGAACCACGA CAAATCACGA GACCACTATT TAAGAGCATA GGAAACAAGA GTCATAAGAA AGGTAATAAA GAAAATCAGA AAAACATAGC AGAAAGTCAG AAGGTTCAGA ATAAAAACAA AAATCTTACT GTTCCAATTC CACTTGAGAA TATAACAAAA TTCGCGAAAT TGGAAGATAA AGTCAGTTTC GACAACAGCT ATGCTGGCAT GATAAAGCTT GTAAATGACA ATTTGGATCG GGATCCTAGA AAAAGTACCA TCGATATAGC ATTGCACCAC CGGTTGATTT CGAAGAATTT GGTAGCTGAG AAAGAGAAAT TAGAGTTGAA ACCTGATTGT TACAGCGATT TCTATCACAA AAATGCTTTG AATGTGACGA GCTTCTTCAA CAGTAGTGAT ATTGACTCGT TCTTTGAAGC TTTGAGTGGA TTCGAGAGCC AACGTGAGTT GATTCGTGAC AAGCTTAAGA GAGAAATTCC ATTAGTGTAA
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Protein sequence | MVVRKPKRTH KDVDEDIRRY KELLKRDIGT DIPPKRCRVK VEYEPEVEIK REEPEPKAVI AFRQTRSVTR RMAENPPMPR VSKPVETEPR QITRPLFKSI GNKSHKKGNK ENQKNIAESQ KVQNKNKNLT VPIPLENITK FAKLEDKVSF DNSYAGMIKL VNDNLDRDPR KSTIDIALHH RLISKNLVAE KEKLELKPDC YSDFYHKNAL NVTSFFNSSD IDSFFEALSG FESQRELIRD KLKREIPLV
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