Gene PICST_32124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32124 
Symbol 
ID4839415 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp734452 
End bp735725 
Gene Length1274 bp 
Protein Length312 aa 
Translation table12 
GC content37% 
IMG OID640390730 
Productpredicted protein 
Protein accessionXP_001384807 
Protein GI150865545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.099626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0197604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATGT ATCGATAAAT AAATGTGTAA CAGAATCAGT TGTAGTAGTT ATCAGTTGTG 
TAGTTGTATT TGTAGGTAAT CTGTTGTCTA CTACGTGTAG TTCTTAATAT TGATATGGTT
ATTCTGTTCC AGTTTTTGGT GTGTGTTATT GTAATTCTTG AACTTTACCT TTGTTTCACT
TCATGTAGCT CTTTTTATTG TTGTATCTTT CTTCGCCTGG TATTGCTTCT CTTCATATTC
TATCACAATC ATTCTTGGCT AGTTGCACCC ATTTATTATC GCTTATCGCA TCTCCAGAAA
AAAATATTAT CGTACAGAAT TCACTGAAAA ATCGTTTTAG TTTCATTTGC ATTTCTCTTT
TAAATTAATA ACTACAGGAT ATGGCTGGGG ATCTCAACTT GAAGAAGTCA TGGAACCCGG
CGTTGGTTAA GAACCAGAAG AAAGTATGGG AAGAAGAACA AAATAAACTT AAAGAATTGA
AACGAATAAA GGAACTCAAC CAAGAGTTCC AGAAAGAACA AGAATACAGA AACTTGTTGA
AGCTTCAATA CGGAGAAGAT TTCAACGAAG GGGATTTGAA GAAAAATGAA AAGTTGAAGC
TCTCCAAATT AAACTGGATG TATGATGACA TGCCCAAGAC TGATGAACCT ACAGAGAACC
TGAGTGGTTT TACCGAGAGC AACGAAGAAT TCTTGGAAGG CAAAACGAAG GTGGAAAATC
TCCTAAATGG AAATAAGGCC TTCAACAGAA ACAAGCCAAG TGACAATATC AACAGAATCA
TCAATGTTGG AAAAACTGTT TCTTCGGATA ACAAAGTTGC ACAAGAAGAT CCATTGCTTA
GTATTAGATC TCAGCAACAG AGAATCATCA GAAACCAACA GGAGAAGATG ATTCACAGCC
ACCGTTCACG TGAAAGCTCC AGAAATGATG GGGATAGAAG AGAAAGAGAG AGATCAGATA
AAGAAAGAAA AGAGTATAGA TCAGAAAGGT CAAACAGAGA AAGATCAAGC AGAGAAAGAT
CAGACAGAGA AAGATCAGAC AGAGAAAGAT CAGACAGAGA AAGATCAGAC AGAGAAAGAT
CAGACAGAGA AAGATCAGAC AGAGAAAGAT CAAATAGAGA TAAAGACAGA TCCCATAGAT
CAAGTCACCA TCGCCATCAT CATCATAGAA GCAGAGATCG AAGTCCTAGC TCTAGACATG
ATTCAGATAG AAGAGACCAT TCACCTCTAA GAAGTAATAG GTCCATAGAT GAAGCCAGGG
TTGAGTCTAA ATAA
 
Protein sequence
MILNIDMVIS FQFLDMAGDL NLKKSWNPAL VKNQKKVWEE EQNKLKELKR IKELNQEFQK 
EQEYRNLLKL QYGEDFNEGD LKKNEKLKLS KLNWMYDDMP KTDEPTENSS GFTESNEEFL
EGKTKVENLL NGNKAFNRNK PSDNINRIIN VGKTVSSDNK VAQEDPLLSI RSQQQRIIRN
QQEKMIHSHR SRESSRNDGD RRERERSDKE RKEYRSERSN RERSSRERSD RERSDRERSD
RERSDRERSD RERSDRERSN RDKDRSHRSS HHRHHHHRSR DRSPSSRHDS DRRDHSPLRS
NRSIDEARVE SK