Gene PICST_32114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32114 
Symbol 
ID4839460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp711120 
End bp711725 
Gene Length606 bp 
Protein Length201 aa 
Translation table12 
GC content47% 
IMG OID640390775 
Productpredicted protein 
Protein accessionXP_001384803 
Protein GI126136559 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.223556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.54599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTATT ACATTGGCCG TTTCCTTGGA CAGTTGTTAA AGAACTTCAG AGCTGGCGAT 
GCCAAGCTTC TCATTAACCG GTTAGAATTG AAGGATCAAG AGCAGGAGAT CTCTGTGACT
AGCTCGTTGT TCGCTGATGA TGGTTACATG CCCCTTGAAA CAGCAGGGTT AGGTGTAGGC
GATAACAAGT CTCCGCCATT GAAGATTGCT TTGTCAACTC ATCTTGACGA AATAAAATCG
CTTGTCCTTA TCTGTCAGGA CATCGACGTA CCAATTCCTT TCCCAATCAC TCATTTCCTT
GCCTATGGAA TCGCTCCTGG CGAAGTGGTG GAATTCGGTC TTGATGATCT TTCCGAGACA
AACAATGGCA GCGAAAAGTG TAGTCTTGGT ACGTGCTCTC TTGGGAAAGT GGGATGGATT
GGCCCACGAC CAGTTCCTGG CCATGGAGAC CATCGCTATG TTTTCCAAGT GTTCGGCTTG
AACGAAGCAG CTTCTCAAGC GATCAGCGAC TCTACCACAC GTTTGAATAC TGATCAGATC
GTTGAAATCA TTCAAGGAAA TGTAGTGGCT TTTGGCGCAC TTACGGGGAA ATACCGGAGA
GACTAG
 
Protein sequence
MSYYIGRFLG QLLKNFRAGD AKLLINRLEL KDQEQEISVT SSLFADDGYM PLETAGLGVG 
DNKSPPLKIA LSTHLDEIKS LVLICQDIDV PIPFPITHFL AYGIAPGEVV EFGLDDLSET
NNGSEKCSLG TCSLGKVGWI GPRPVPGHGD HRYVFQVFGL NEAASQAISD STTRLNTDQI
VEIIQGNVVA FGALTGKYRR D