| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32113 |
|---|
| Symbol | |
|---|
| ID | 4839459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | - |
|---|
| Start bp | 709379 |
|---|
| End bp | 710551 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640390774 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001385145 |
|---|
| Protein GI | 150865790 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.384882 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAT GGGCAGAAAC TCTACAGAGA TCTCCCGTTA AGGAATCTGA CGAGTTATGC
CAGACATACA GTCAGAGAGG GGAGGCCCTC CGTGCAAAAT GGGATACGGA AGGTCAACTC
AGCGATGAAG AATACGACCA GCTCGATACC AGTATGCTAG TTGTAAATTG TTTAAATACG
CTTTCTGATG CCAAATACAA GCGCCAACGG AAAAGATTCG ACGACTGGAA TACGCCTGAA
GAACTTCGTA TATCTACTCT CAGCGCCATC GGCAGAGTCA TCTGTGACAC GAGGACAGTT
AGAATTCGCA TCGAGTCCTT TGAAATCAAA CTGAGCCTGT CTAAACCCCA AATGTTCATC
GAGGATAAAG CTCGGATCAT ACTTACTCAC TTCAAGGAAA CCATTCCTGA TACGCTAGAT
GAGTTAGAAG AACACACCGA GCTGAGTATT GCCAGTCTCC AAAAAAAAAT TCAACTTTAC
CAAGACCAGA TATCCCCAGA AGACTCTCTG GAGCATGAAT TAAATCGGCA CATCAACAAT
ACCAACCTTC GAATTAAAGA ATTGGAGAAA ACACTTCAAA TTACTCAAAG GATTTATGAT
ATAAAGGAGT ATTTTCACAT ACATATGCGG GACAATCTGT ACTTAGACTT TGACTTCTCC
ATTACCGAAA GTAATTCTAG AGCTCCACGC TTCAAATCTC AAGGTCCAAG GAAGTGGCTG
CAAACCAAAT TTGAAGAAAT ATTCGACCCC TACTACGCCG GCGTAGAAGG CAACTACAGG
TTTAAACTAA AACTTATACC GATCTCTAGG GCCCCCAATG TCTTTCTTGT GTGTGTCACG
GCTCCCAATG GTCATACAGA CATGGACTCT CTAGTCCATG TAATGTTCAA CCCAAACAAG
CTTGACATTC CTCAAGCACC TCAAGACGGG TATTCACAAC GTCAAGTCGG AGAGCCTATC
TATTACAAAG TATTGGCCAA ACACCTAGTC GAAAAAAGAT ACTATGGGGG TAAACAACAC
AACTCCCTTA CTAAGTCTGT TTTCTATTTA ATTGAAACTG AGTCTGACAG GATTATAAGA
CGGAGAAATG GTCTCCTAAA GGGCGTCCAA ATTGACATCA TCTCTTCATA TCGATCACCT
TATCCACACC AAAGTTACAA AGGAACTGAA TAG
|
|---|
| Protein sequence | MTEWAETLQR SPVKESDELC QTYSQRGEAL RAKWDTEGQL SDEEYDQLDT SMLVVNCLNT
LSDAKYKRQR KRFDDWNTPE ELRISTLSAI GRVICDTRTV RIRIESFEIK SSSSKPQMFI
EDKARIILTH FKETIPDTLD ELEEHTESSI ASLQKKIQLY QDQISPEDSS EHELNRHINN
TNLRIKELEK TLQITQRIYD IKEYFHIHMR DNSYLDFDFS ITESNSRAPR FKSQGPRKWS
QTKFEEIFDP YYAGVEGNYR FKLKLIPISR APNVFLVCVT APNGHTDMDS LVHVMFNPNK
LDIPQAPQDG YSQRQVGEPI YYKVLAKHLV EKRYYGGKQH NSLTKSVFYL IETESDRIIR
RRNGLLKGVQ IDIISSYRSP YPHQSYKGTE
|
|---|
| |