Gene PICST_32112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32112 
Symbol 
ID4839458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp708002 
End bp708535 
Gene Length534 bp 
Protein Length177 aa 
Translation table12 
GC content41% 
IMG OID640390773 
Productpredicted protein 
Protein accessionXP_001385144 
Protein GI126137241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.587542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.339031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGAA ATTTCATCCG TAGAAGTTCG TCAAGTTCGA TACCTTTCGA GCCTGTTCCA 
ATTAACAAAT ACAATCAAGT CAGGTCACAG TTCAACTTCA AGCCTAAGAA GACACAAGGT
TTGGTATACA ACCCTGCTTC TGCTATTCAC AAGCCATCTA TAAAGACTCC TAGGGCATTC
TTGCCGACCA ACGACCCAAG AAGACAATTG AATAATGAAG CAGAGTACAC CAAGGAACAG
TTACAACACT ATCCCATAAT CACAGCATAT AAGGCGCAAG GGGAAAGAGA CTATAGCATT
ACAGCCGAAG TAGCCAAGAA GATTTACGAT TTGAGAAAAC AAGACCCACA GACGTGGACT
GTAGCCAAGT TGAGTAAAGA ATTCGACATC GATTTGCAAA AGGTCAATGT GCTCACTGGT
ATTTTGGATA AGAAGCTCAA AAACAACAAT TTGGACGGAT TGAACGAAAG ACAGGTCAAG
AAAGCCACTG AAAAGAAGAA GAGAGTGGAG ATGTGGTTGA GGAACGAGTT CTAG
 
Protein sequence
MFRNFIRRSS SSSIPFEPVP INKYNQVRSQ FNFKPKKTQG LVYNPASAIH KPSIKTPRAF 
LPTNDPRRQL NNEAEYTKEQ LQHYPIITAY KAQGERDYSI TAEVAKKIYD LRKQDPQTWT
VAKLSKEFDI DLQKVNVLTG ILDKKLKNNN LDGLNERQVK KATEKKKRVE MWLRNEF