Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32112 |
Symbol | |
ID | 4839458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 708002 |
End bp | 708535 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640390773 |
Product | predicted protein |
Protein accession | XP_001385144 |
Protein GI | 126137241 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.587542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.339031 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAGAA ATTTCATCCG TAGAAGTTCG TCAAGTTCGA TACCTTTCGA GCCTGTTCCA ATTAACAAAT ACAATCAAGT CAGGTCACAG TTCAACTTCA AGCCTAAGAA GACACAAGGT TTGGTATACA ACCCTGCTTC TGCTATTCAC AAGCCATCTA TAAAGACTCC TAGGGCATTC TTGCCGACCA ACGACCCAAG AAGACAATTG AATAATGAAG CAGAGTACAC CAAGGAACAG TTACAACACT ATCCCATAAT CACAGCATAT AAGGCGCAAG GGGAAAGAGA CTATAGCATT ACAGCCGAAG TAGCCAAGAA GATTTACGAT TTGAGAAAAC AAGACCCACA GACGTGGACT GTAGCCAAGT TGAGTAAAGA ATTCGACATC GATTTGCAAA AGGTCAATGT GCTCACTGGT ATTTTGGATA AGAAGCTCAA AAACAACAAT TTGGACGGAT TGAACGAAAG ACAGGTCAAG AAAGCCACTG AAAAGAAGAA GAGAGTGGAG ATGTGGTTGA GGAACGAGTT CTAG
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Protein sequence | MFRNFIRRSS SSSIPFEPVP INKYNQVRSQ FNFKPKKTQG LVYNPASAIH KPSIKTPRAF LPTNDPRRQL NNEAEYTKEQ LQHYPIITAY KAQGERDYSI TAEVAKKIYD LRKQDPQTWT VAKLSKEFDI DLQKVNVLTG ILDKKLKNNN LDGLNERQVK KATEKKKRVE MWLRNEF
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