Gene PICST_32085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32085 
Symbol 
ID4839725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp646334 
End bp646810 
Gene Length477 bp 
Protein Length158 aa 
Translation table12 
GC content46% 
IMG OID640391040 
Productpredicted protein 
Protein accessionXP_001385130 
Protein GI150865783 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.208592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATCC TGTCTACCGT GTCTATGCCT ATCCTGTCTA CCGTGTCTAC CTTGTCTACC 
GTGTCTATGC CTATCCTGTC TACCGTGTCT ATGCCTATCC TGTCTACCGT GTCTATGCCT
ATCCTGTCTA CCGTGTCTAT GCCTATCCTG TCTATCTCTG TGTCCTTTCC TGGGGGTGTG
TCTGCCCCAC CTATTCGTGT TCGTTCTATG TTGCTGCCTG TTTCTGATCT TCTGTCTGAT
GATGTGGCCA TGGCCAATGA CGCTGCCATG GCTGATGACG ATACCATTGT TGATAACGGT
ACGGTAATTG ATGACGTTGT CCTGCCTGTT GCTAGTAAGC TGGCTGATGA TGGTGCCCTG
GCTGATGATT CTGTTGAATA TGTGGAATGT GCTGCTATTA AAACTAAAGG CATATTCTAT
ATTCTAATTA TAATCCAATG CGTAAAGTTT ATGAATGCAG GATTTGCAGC CATTTAG
 
Protein sequence
MPISSTVSMP ISSTVSTLST VSMPISSTVS MPISSTVSMP ISSTVSMPIS SISVSFPGGV 
SAPPIRVRSM LSPVSDLSSD DVAMANDAAM ADDDTIVDNG TVIDDVVSPV ASKSADDGAS
ADDSVEYVEC AAIKTKGIFY ILIIIQCVKF MNAGFAAI