Gene PICST_32082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32082 
Symbol 
ID4839724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp639479 
End bp640522 
Gene Length1044 bp 
Protein Length347 aa 
Translation table12 
GC content37% 
IMG OID640391039 
Productpredicted protein 
Protein accessionXP_001385129 
Protein GI150865782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.249288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.130559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAA GAATAACTAA AACATCAGCT ATCCATGATA AACATTCAAT TATAACAAGG 
GATACTGAAC TGGGATTTGA ATATGATTCA GATTCAGAGT CTGACGTAGA AAACGTATTT
CCTAACATAA GAGTACAGAG GATTAGGGAC AAATTATACC AAGACGAAGA CGAAGACGAA
GACGAGCAAG TTGACGATGA AGATGAAGAA GATGAAGAAG ATAAAGAGGA TGAAGAAGAT
GATGCAGATA ACTTTGAAAA TGAAAATGAA GAAGAAGTGG ACGATTATAT CGATGGTGAC
GGTATGAGAA ATTTTGATAT GGGAGAATCT ATTGAAGTGG GTGACGTTGA TTCAACCAGC
GAAAGAAAAA ATGGAAAAAT AAAAAAATTA ACATCTAGGC AGTTGCAGAA AGAGCAAAAG
AGAATAAAGA GAACAGGCGT CTGTTACTTG TCTCGAATTC CACCCTACAT GAAACCTGCA
ACATTGAGGT CAATACTATC TAGATTTGGT AAGATTGATC GTTTGTTCTT GAAGCCTGAA
GACTCAGCAA TATATCACAA GAGGGTAAAG TATGGTGGTA ATAAAAAGAA GAATTTTACT
GAAGGTTGGG TAGAATTTGT AAATAAAAAA GACGCCAAGA TGTGTGCTAG TACCCTTAAT
GCTAATAAGT TAGGCGGAAG AAAGACGTCT TATTATTACG ATGATGTCAT CAACATGAAA
TATTTGTCGG GGTTCAAGTG GTTTGATTTA ACGCAACAGA TTGCTAAGGA GAACGAAGTA
AGGCAGGCAA AATTGTCTCT AGAGTTATCA CAACAACAAA AGTTGAACAA GACTTTTGTG
AACAACGTTG AGAAGTCGAA ACTAGTTTCT ACCATACAGA GGAAAAGAAA GGAAAGAGAC
CCTGAACATG AGTCGGATTC ACATATACGC AGAAGTTTCA AACAAAGAAA AGTCACTAGC
ACAAGGGCCG ATGCCGATGA AGAACTCAAA GCAAGAGCCC AGCCTGATCG CAAGTTAAGT
GATGTTTTGT CAAAGGTGTT TTGA
 
Protein sequence
MSKRITKTSA IHDKHSIITR DTESGFEYDS DSESDVENVF PNIRVQRIRD KLYQDEDEDE 
DEQVDDEDEE DEEDKEDEED DADNFENENE EEVDDYIDGD GMRNFDMGES IEVGDVDSTS
ERKNGKIKKL TSRQLQKEQK RIKRTGVCYL SRIPPYMKPA TLRSILSRFG KIDRLFLKPE
DSAIYHKRVK YGGNKKKNFT EGWVEFVNKK DAKMCASTLN ANKLGGRKTS YYYDDVINMK
YLSGFKWFDL TQQIAKENEV RQAKLSLELS QQQKLNKTFV NNVEKSKLVS TIQRKRKERD
PEHESDSHIR RSFKQRKVTS TRADADEELK ARAQPDRKLS DVLSKVF