Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32082 |
Symbol | |
ID | 4839724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 639479 |
End bp | 640522 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 12 |
GC content | 37% |
IMG OID | 640391039 |
Product | predicted protein |
Protein accession | XP_001385129 |
Protein GI | 150865782 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.249288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.130559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAA GAATAACTAA AACATCAGCT ATCCATGATA AACATTCAAT TATAACAAGG GATACTGAAC TGGGATTTGA ATATGATTCA GATTCAGAGT CTGACGTAGA AAACGTATTT CCTAACATAA GAGTACAGAG GATTAGGGAC AAATTATACC AAGACGAAGA CGAAGACGAA GACGAGCAAG TTGACGATGA AGATGAAGAA GATGAAGAAG ATAAAGAGGA TGAAGAAGAT GATGCAGATA ACTTTGAAAA TGAAAATGAA GAAGAAGTGG ACGATTATAT CGATGGTGAC GGTATGAGAA ATTTTGATAT GGGAGAATCT ATTGAAGTGG GTGACGTTGA TTCAACCAGC GAAAGAAAAA ATGGAAAAAT AAAAAAATTA ACATCTAGGC AGTTGCAGAA AGAGCAAAAG AGAATAAAGA GAACAGGCGT CTGTTACTTG TCTCGAATTC CACCCTACAT GAAACCTGCA ACATTGAGGT CAATACTATC TAGATTTGGT AAGATTGATC GTTTGTTCTT GAAGCCTGAA GACTCAGCAA TATATCACAA GAGGGTAAAG TATGGTGGTA ATAAAAAGAA GAATTTTACT GAAGGTTGGG TAGAATTTGT AAATAAAAAA GACGCCAAGA TGTGTGCTAG TACCCTTAAT GCTAATAAGT TAGGCGGAAG AAAGACGTCT TATTATTACG ATGATGTCAT CAACATGAAA TATTTGTCGG GGTTCAAGTG GTTTGATTTA ACGCAACAGA TTGCTAAGGA GAACGAAGTA AGGCAGGCAA AATTGTCTCT AGAGTTATCA CAACAACAAA AGTTGAACAA GACTTTTGTG AACAACGTTG AGAAGTCGAA ACTAGTTTCT ACCATACAGA GGAAAAGAAA GGAAAGAGAC CCTGAACATG AGTCGGATTC ACATATACGC AGAAGTTTCA AACAAAGAAA AGTCACTAGC ACAAGGGCCG ATGCCGATGA AGAACTCAAA GCAAGAGCCC AGCCTGATCG CAAGTTAAGT GATGTTTTGT CAAAGGTGTT TTGA
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Protein sequence | MSKRITKTSA IHDKHSIITR DTESGFEYDS DSESDVENVF PNIRVQRIRD KLYQDEDEDE DEQVDDEDEE DEEDKEDEED DADNFENENE EEVDDYIDGD GMRNFDMGES IEVGDVDSTS ERKNGKIKKL TSRQLQKEQK RIKRTGVCYL SRIPPYMKPA TLRSILSRFG KIDRLFLKPE DSAIYHKRVK YGGNKKKNFT EGWVEFVNKK DAKMCASTLN ANKLGGRKTS YYYDDVINMK YLSGFKWFDL TQQIAKENEV RQAKLSLELS QQQKLNKTFV NNVEKSKLVS TIQRKRKERD PEHESDSHIR RSFKQRKVTS TRADADEELK ARAQPDRKLS DVLSKVF
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