| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32075 |
|---|
| Symbol | |
|---|
| ID | 4839102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | - |
|---|
| Start bp | 624197 |
|---|
| End bp | 626905 |
|---|
| Gene Length | 2709 bp |
|---|
| Protein Length | 902 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640390417 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001385127 |
|---|
| Protein GI | 150865780 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCTC TATTGAGTGA AATAGAGTTG GATGGGAGTC CAGATCAAGC TGAGTTGCTA
TTATCTACTC TTAAGAACAC TATCACCAGT ATCTCAGCTA GACGTGATGC TCTCGCAGAC
CAACTAAAGA ATTACAAAGC ATTACATATA CAATTAGAAG AGAATGAAAA GCAGCTTGAA
TCAGTCACAG TATACTTAGG AGAAGGGTAT TTTGTTGAAA GAACCCCTCA ACAGGCGTTG
GTGTTCATGA GCAGTCGAGT TGTCACGTTG GAAAAGGCAG TTTCTGAGTT AGATGCCAAA
GCAAAAGAAG CAGAGGACAC AATATTCAAA TTAAGCAAAT TTAACGAACT TGCAAAGCTC
GAAAGCAATA GCAAGGAGGA AAAAGTTAAT GAAGAAGGCT TACTTTTTAT GGATATTAAG
GAAGAATTGG ACGAAGAAGG ACATGTAATC AGTGCTACAA TTAATGACAA ACCATTGGAA
CATCCCCTCG AGAAAGCTGA CACGATAGAG TCTCCTGCTA GTATATTAAA ATTCCCGCAG
AAGAAGGAAT TTGAGTACAT TCAAGAGAGT TTGATTGAAG AGAATGGAAC ATTTTCTAAC
GATTCCGATC CAATTAAAGA AGATCAAGAC CAATTACAAG AACTATTTGA GGATATGGAG
ATTGTTCAAA GACCCCTGAA AAGTATCAAT GATGCCATTG TAAATCGAGA TGATTTGCTT
AATAAAATTG ATGAGCTCAA GATAAGCCCT GACGATAAAT TCAAATTGAA ACAAATGTGC
TTGGAAGAGT ATGCAAAATT ATATGATACC AAAGGCAAGG TCGATCAGGA CAAGGAAAGA
AGCAATGTGC AAGATTCAAC AGGCGCAGAT ATCTCTGAAG AATCACTTGA TGAGGTCAAG
AGTAAGGAAA GACAAGAAGT AATTGCCAGC ATTGTCAAGG AGAATAACTT GGATGTTGTG
GTTTCTACAA GCACACCGGT TAATGAAAAA AGTGTTGCAA TAGATAGAAA CGATATATTA
GAGCTTGAAT TACTTGCTGA TGACTTTGAC GACTCAGAAG CTTCGGTGGT AAAGTATGCA
GATGATGAAG AGTGGGACTT TGACTTTTCC GATGGAGAAG AAATAGATGA CGATGATGAT
GATGATGATG ATGATGATCT TGCAGACGAG CTATTATACG GTGACAGATC CGCAATTTTG
ACTCCAAACC AGAATGTGAC TGCGAGTAAC ATGCTTTGGG ATCAGGTTAT GAAGTTGCGT
GAAACTGGAA CAGAGGACGT AAATGGGAAT CCCCCAATAG AGACAGCAAG GACAGAAAAG
AACAATAAAT CTAAGAAAAC AGTCAGATTT GCTGAGAATT TGCAAATTAA AGAGGTCGAG
AATATTAGTG AATCATTAAG GAATGTTCCG CACCGACACA GGGTCTCATT GTATAGGCAA
AACTTGATTG CAACAAACAG AGCAAATTCC ACCCATGATG AAATCGAATA TGTTGAAGAC
TTTCCATCAA TTTCAGATAG CTTTGTTGAA GATAACCAAC AGGACAACTC CAAAGCGGAA
AATAATATCG TGGAGAATTA CATCATTGAG AATAACATCG TTGAGGATAA CATGGTTGAG
AATAACATCG TGGAGAATAA CGTTGTTGAG AAAAACATTG TGGATAGCAT ACCGCAGACA
ATACAAGAAA ATACTATTGA ACAGAATCAA CTCGATTCTA AGGGGGTTTC AAAATTCAAA
AAGGGTATTC TTCAGAGTTT ACCTAGAAAA TTGATTGTGA ATGAAGCATT GCCTAATGCA
GCAAGTGGAG AAACTTGGAA TAGAAGGGAA ATGATCGAGA AATCAATAGT TGAAGTAGAG
GAGAAGAAGA TCTCTCCCCT AGTCAAGGAC GAAACTGATG GTGTTCATCG TGAAGTTGTC
GAAAGACAAC CAACGACTAC TGCTTCTACT GCTAGTGATA AAGAAAAAGT CGAACGGAAA
GTTTCAAAGT TTAGAGCAAA TAGAACTAAA TTGAAAAGTT CAGCAGCAAA AAATGATCTA
TTCGAAGAGG ATAGGTCTAT CCAAAGAAGT GATCTTGACG AAGCCAACAT TAGTATAGAA
GAGGACGAAG TCATCGACGA AGAAGTGAGA AGTCACTCAA GCATCAAAGA AACAACATTG
GATTATCTTT CCCTACAGGA TGATATGGAC ACAATGGCCA AGGCATATGT TCTTGGTATA
TACGATGACG ATATTAGGAC CGTGGGCCCT GTTGTAGATA AACTCGACGA CTTTGAAGTT
CTTAATAGAA TGATAGATTC AATGTCAAGC AAAGAATCGC TTTCAAACCA AGAAGAAACC
AACAGAAAAT CAGAGATCTT GAAGAGTTTG AAAGATTACG ATACGTCATT TGATCCTCAG
CTCGATGAAA TTGTACCTGA ACTGGTACCC GAAGACGAAG AAGCAGACGA GGGTCCTATT
TTGCTAGACG AGATTGTGGA AAATGATTTT AATGCTACTG GTGAAATTGA GGATTTCGAT
GAAATGGAAA ACGAGATGCT AAATCAAGAA GTAGTAACCA ATTATCATAA GTTGAGGCAG
AGGATAATTT TTCAGAATAA TGATAAGGGC TTCCGAAAAA CAGACGAAGA ATTAGCTATG
GAACCTTTGG ATGAAGACGG AAACCCCATC AAGGTCAGTA GATTTAAGGC TGCAAGAATG
ACCAACTAG
|
|---|
| Protein sequence | MSSLLSEIEL DGSPDQAELL LSTLKNTITS ISARRDALAD QLKNYKALHI QLEENEKQLE
SVTVYLGEGY FVERTPQQAL VFMSSRVVTL EKAVSELDAK AKEAEDTIFK LSKFNELAKL
ESNSKEEKVN EEGLLFMDIK EELDEEGHVI SATINDKPLE HPLEKADTIE SPASILKFPQ
KKEFEYIQES LIEENGTFSN DSDPIKEDQD QLQELFEDME IVQRPSKSIN DAIVNRDDLL
NKIDELKISP DDKFKLKQMC LEEYAKLYDT KGKVDQDKER SNVQDSTGAD ISEESLDEVK
SKERQEVIAS IVKENNLDVV VSTSTPVNEK SVAIDRNDIL ELELLADDFD DSEASVVKYA
DDEEWDFDFS DGEEIDDDDD DDDDDDLADE LLYGDRSAIL TPNQNVTASN MLWDQVMKLR
ETGTEDVNGN PPIETARTEK NNKSKKTVRF AENLQIKEVE NISESLRNVP HRHRVSLYRQ
NLIATNRANS THDEIEYVED FPSISDSFVE DNQQDNSKAE NNIVENYIIE NNIVEDNMVE
NNIVENNVVE KNIVDSIPQT IQENTIEQNQ LDSKGVSKFK KGILQSLPRK LIVNEALPNA
ASGETWNRRE MIEKSIVEVE EKKISPLVKD ETDGVHREVV ERQPTTTAST ASDKEKVERK
VSKFRANRTK LKSSAAKNDL FEEDRSIQRS DLDEANISIE EDEVIDEEVR SHSSIKETTL
DYLSLQDDMD TMAKAYVLGI YDDDIRTVGP VVDKLDDFEV LNRMIDSMSS KESLSNQEET
NRKSEILKSL KDYDTSFDPQ LDEIVPESVP EDEEADEGPI LLDEIVENDF NATGEIEDFD
EMENEMLNQE VVTNYHKLRQ RIIFQNNDKG FRKTDEELAM EPLDEDGNPI KVSRFKAARM
TN
|
|---|
| |