| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32069 |
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| Symbol | HEX1 |
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| ID | 4839099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 609304 |
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| End bp | 611148 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640390414 |
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| Product | Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase |
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| Protein accession | XP_001384784 |
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| Protein GI | 150865529 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.28283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGA CTAGCTTGGT GGTTACTATC GCTCCATTGT TGGCATTGAC CCAGGCGGTT
AAAGTAAATC CACTCCCAGC TCCTAGACTG ATCGACTGGC TCGATGAAAA CCCAATTTCT
GTGAATTTGG ATAAGTTGAA CTTGGAAATT GGCGCCGAAA ACTCGATTAT TTCAGAAGCC
TTCTACAGAA CCGTTTCAAC ATTGAGAAAG TTGAAATGGT ATCCAGCCGC TACTGAAGCT
CCTATCTCCA GCTTTGTTCC ATTTCCTACT GCTGAAGCTG CTGTTGACGC CAAAAAGAAA
AAAAGAGACA GCCAGCGTAC CTTTGACTTG TCTGGCTTGA GCGTTGTGGA AGTCACAGTT
AACGATTATG CCGCTGACCT TCAAATGGGA GTCAATGAGA CATATACCTT GTCCGTTTCC
CCCTCCAGTA TTATAATTGA ATCTGAAACC GTTTGGGGGG TTCTCCACGC TTTCACTACC
TTGCAACAAT TGATCATCTA CGACAATAGC AAGTTCGTCA TTGAGGGATC AGTAAACATA
TGGGACGCCC CTCTTTACCA ACATCGTGGT GTGATGGTTG ATACTGGTCG TAATTACTTG
AGCATTGACT CCATCTTGGA TCAAATCGAC ATGATGGCTC TTTCCAAGTT GAACTCTTTG
CACATTCACC TAGACGATGC TCAGAGTTGG CCATTGTTAT TGAACTCGTA CCCAGAAATG
ATCATGGATG CCTACAGTGA ACGTGAAATC TACACTATCC AAGACCTTCA ACACATCATC
AAGTATGCAA AGAACAGAGG TGTGAGAGTT ATACCAGAAA TCGACCTTCC AGGACATGCT
CGCGCTGGTT GGAGACAGAT CAACCCTGAT TTGGTTGCTT GTGGTGACTC ATGGTGGTCT
AACGACGTCT GGGCTTCCCA TACTGCTGTA GAGCCACCTC CAGGTCAGTT GGACATCATG
AATGATGAAG TATACGAAGT CATTGCTGAT GTTTATAATG AATTGAGTGA GATTTTCACT
GATAATGTAT TTCACGTTGG CGCCGATGAG ATCCAAACTG GATGTTACAA CATGTCGACC
TTGATTCAAA ACTGGTTCAA GGAAGATCCT TCAAGATCCT GGAATGACTT AAGTCAGTAC
TATGTTGACA AGGCATACCC AATCTTCATG AACAAGACTA ACAGACGTTT GATGATGTGG
GAAGATATAC TCTTGACTCC AGAAGGTGCC CACACTTTGC CTACCGATGT TATTTTGCAA
TCTTGGAACA ACGACTTGGT TAACATTCAA AACTTGACTT CTCGTGGATA CGACGTCATT
GTTTCGTCGT CTTCGCACTT CTACTTGGAC TGTGGTTTTG GTGGATGGGT TTCCAACGAT
CCAAGATACA TTGACGACTA CTCGAACGAT GTGTTCAACA CCGGTTTAGG AGGTTCTTGG
TGTGCTCCTT ACAAGACCTG GCAAAGAATC TACGACTACG ATTTTACTGC CAACTTGACA
GATGCTCAGG CTGAACACGT TATTGGTGCC GAAGTGGCCT TGTGGTCCGA GCAAGTCGAC
TCTACTGTTT TAACCCAAAA GATCTGGCCA AGAGCTGCTG CATTGGCTGA ATCCACTTGG
TCTGGTAACC GTAACTCTGA AGGATACTTG AGAACCAACG AGTTGACTCA AAGAATCTTG
AACTTCAGAG AATATTTGGT TGCTCTTGGT TTCGGTGCTT CACCTCTTGT GCCAAAGTAC
TGTTTGCTTA ACCCTCATGC TTGTGATTTG TACCAAAATC AAACTGTTCT TGAGCAGTAT
GGTACACACA ACGATAAGAA CTCCACTATT GCTGTTCTTA ACTGA
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| Protein sequence | MKLTSLVVTI APLLALTQAV KVNPLPAPRS IDWLDENPIS VNLDKLNLEI GAENSIISEA
FYRTVSTLRK LKWYPAATEA PISSFVPFPT AEAAVDAKKK KRDSQRTFDL SGLSVVEVTV
NDYAADLQMG VNETYTLSVS PSSIIIESET VWGVLHAFTT LQQLIIYDNS KFVIEGSVNI
WDAPLYQHRG VMVDTGRNYL SIDSILDQID MMALSKLNSL HIHLDDAQSW PLLLNSYPEM
IMDAYSEREI YTIQDLQHII KYAKNRGVRV IPEIDLPGHA RAGWRQINPD LVACGDSWWS
NDVWASHTAV EPPPGQLDIM NDEVYEVIAD VYNELSEIFT DNVFHVGADE IQTGCYNMST
LIQNWFKEDP SRSWNDLSQY YVDKAYPIFM NKTNRRLMMW EDILLTPEGA HTLPTDVILQ
SWNNDLVNIQ NLTSRGYDVI VSSSSHFYLD CGFGGWVSND PRYIDDYSND VFNTGLGGSW
CAPYKTWQRI YDYDFTANLT DAQAEHVIGA EVALWSEQVD STVLTQKIWP RAAALAESTW
SGNRNSEGYL RTNELTQRIL NFREYLVALG FGASPLVPKY CLLNPHACDL YQNQTVLEQY
GTHNDKNSTI AVLN
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