Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32054 |
Symbol | |
ID | 4839095 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 569801 |
End bp | 570920 |
Gene Length | 1120 bp |
Protein Length | 125 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640390410 |
Product | predicted protein |
Protein accession | XP_001384773 |
Protein GI | 126136499 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.685578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.890765 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGTAAG TTGGTGAGAA TTGAGTCCGG GTCCATCTTG CTCCGAAGTA AGAGTGAGTG GCTTAAGCGT ATACAAGAGA AAGCTGTATT TAGAATAAAA TAGCTTATTA GTAGATATGA ATGCAACAAT ATGATTAAGA CTGTTGTTGG ATTGGAGGAA TAGAAAGTAC AATATTCTAG CCACTAATTC AGCGGGTAGA TGTTCTAGAA GTAGCGGTTC AATGGGACTA GTCTTGGGAG TAGGAGTTTT GCAGCAGTCA TTTTGCTGGA CGTTGATGGA TGTGACTTCG TGATTTTCTG AAATACATCT CTGTATGTGA TGCTTTTTCG GTGCAGACAT TATGGCGTCG TAGTGGATAT CATTTTTTGC AATCGTCGAG TAATAATATA TGGTTGCAAC TTTGTGCGAA GATAATAACT TTTACAAAAC GTGAGCTATA TTAAACCGGA ACAAAGTTAA AAATTCCTAT AACTCAGCAA TTGGTACTGA GGAACAAATA TATCTAGACA GTATTATTGC CATTATTTTG TAGAAGACAA CCCTTTCGTG GTAAAACAAC TTCTTCACCA TGCCATAGAG CCCTTACATT GCATTTGGCA TTACCTGCAG TACCTCTCGA TGAAAAAAAG GACGAATCAA AAGAACCGTA CAGTGAGATT CATCTTCAAT TCAGTGTTTA ATTGCAAAGG TTTTTCTTTA CCAAACCACA ATCACTAGTT TATACGATGA GAGTCTCTAC CACTTTATTA AACCGTGTTC CCCTCATCAA GTTTATTGGC GGTCCACATC TTGCCCCAAG TATGTAATTC AGATAGGAAT ATTTCAATCT GAAAAATCCC GGAGAATCCT CGGGATATGC TTAGATTGTC CAAAAGAGCT CTGATACTAA CAAAGCCTAT AGAGAATGTA TCGTCTGCTG TGAAAGCACA TCCTATGGCC CCTAACGGCC AGATCCCAAG CGGTGCTGCT GTCAGCACCT ACTTCAACAG CAATCCTATT GAGCCAAAGG AAGGGGAATT CTTCTCCAGA TCTCAATTGT CTGCTAGATT CAGATACAAG GCTCCTAAAG ACCTTGAGAT TGAAGATGTT CTCAGTGGAG GTGCTGATAT CGTCTATTAG
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Protein sequence | MRALTLHLAL PAVPLDEKKD ESKEPYIYTM RVSTTLLNRV PLIKFIGGPH LAPKNVSSAV KAHPMAPNGQ IPSGAAVSTY FNSNPIEPKE GEFFSRSQLS ARFRYKAPKD LEIEDVLSGG ADIVY
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