Gene PICST_32054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32054 
Symbol 
ID4839095 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp569801 
End bp570920 
Gene Length1120 bp 
Protein Length125 aa 
Translation table12 
GC content40% 
IMG OID640390410 
Productpredicted protein 
Protein accessionXP_001384773 
Protein GI126136499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.685578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.890765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTAAG TTGGTGAGAA TTGAGTCCGG GTCCATCTTG CTCCGAAGTA AGAGTGAGTG 
GCTTAAGCGT ATACAAGAGA AAGCTGTATT TAGAATAAAA TAGCTTATTA GTAGATATGA
ATGCAACAAT ATGATTAAGA CTGTTGTTGG ATTGGAGGAA TAGAAAGTAC AATATTCTAG
CCACTAATTC AGCGGGTAGA TGTTCTAGAA GTAGCGGTTC AATGGGACTA GTCTTGGGAG
TAGGAGTTTT GCAGCAGTCA TTTTGCTGGA CGTTGATGGA TGTGACTTCG TGATTTTCTG
AAATACATCT CTGTATGTGA TGCTTTTTCG GTGCAGACAT TATGGCGTCG TAGTGGATAT
CATTTTTTGC AATCGTCGAG TAATAATATA TGGTTGCAAC TTTGTGCGAA GATAATAACT
TTTACAAAAC GTGAGCTATA TTAAACCGGA ACAAAGTTAA AAATTCCTAT AACTCAGCAA
TTGGTACTGA GGAACAAATA TATCTAGACA GTATTATTGC CATTATTTTG TAGAAGACAA
CCCTTTCGTG GTAAAACAAC TTCTTCACCA TGCCATAGAG CCCTTACATT GCATTTGGCA
TTACCTGCAG TACCTCTCGA TGAAAAAAAG GACGAATCAA AAGAACCGTA CAGTGAGATT
CATCTTCAAT TCAGTGTTTA ATTGCAAAGG TTTTTCTTTA CCAAACCACA ATCACTAGTT
TATACGATGA GAGTCTCTAC CACTTTATTA AACCGTGTTC CCCTCATCAA GTTTATTGGC
GGTCCACATC TTGCCCCAAG TATGTAATTC AGATAGGAAT ATTTCAATCT GAAAAATCCC
GGAGAATCCT CGGGATATGC TTAGATTGTC CAAAAGAGCT CTGATACTAA CAAAGCCTAT
AGAGAATGTA TCGTCTGCTG TGAAAGCACA TCCTATGGCC CCTAACGGCC AGATCCCAAG
CGGTGCTGCT GTCAGCACCT ACTTCAACAG CAATCCTATT GAGCCAAAGG AAGGGGAATT
CTTCTCCAGA TCTCAATTGT CTGCTAGATT CAGATACAAG GCTCCTAAAG ACCTTGAGAT
TGAAGATGTT CTCAGTGGAG GTGCTGATAT CGTCTATTAG
 
Protein sequence
MRALTLHLAL PAVPLDEKKD ESKEPYIYTM RVSTTLLNRV PLIKFIGGPH LAPKNVSSAV 
KAHPMAPNGQ IPSGAAVSTY FNSNPIEPKE GEFFSRSQLS ARFRYKAPKD LEIEDVLSGG
ADIVY