Gene PICST_32045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32045 
Symbol 
ID4839254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp548046 
End bp549098 
Gene Length1053 bp 
Protein Length350 aa 
Translation table12 
GC content37% 
IMG OID640390569 
Productpredicted protein 
Protein accessionXP_001385118 
Protein GI150865771 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.621842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTC GAACTGTCTA TCTATTTACA ATTGGAGCAA TCACTGTTCC TATCTATGCC 
AATTTCTTTG CTAACAAGAT CACTGAAATC GATATAACTA ACAAATACTT TCTTCCCGGG
ATCAACCTAG ACTTACTTGG TGACGATGCT GACTACACCA AAATTAATTT GGATGCCCAG
AGATATGAAG AAGACGTGCA AGAGTTCAGT AAACATATTG TTGCTCTTCG CGATAAAGAT
ACGGAATTCA CTGCTCAAGA AACAATAATT GATTTGACAG ACACTGATGA TCTGATTAAT
TTTTCCCAAA TAACGAAGTA TAAATTGAGT CGCCGTGAAG ATTTAAATGA AGCAAGAATG
AACTATATTC TTGAAACGAA TCCCAAGGGC GTGGTAGTCT TTGAAGATAC TAAAAAGGTT
TTAGTTGCCG ATCCCAACGA TATTCTCTAT AAGAGTAATG ACGAGCTAAA AAGAAGAGTC
GAAGCTGGGG AAAAGTTCAA ATATACAGAA GTTGATTTAG GCAATGATTT TGAGAGCCAA
ATCACATACG AACCAATAAT GGTTCCATTA ACTGGATGTT TAAAGTTTCC ATTGGGAAGA
GGAACAGGTT CTGTAGCCTT CTCTTACAGC GTCGGGCTTG AAATGAACAT TAACGGTGAA
GGTGGAATTT CATACTCACC TTCTCAAACT GAACAGAATA TCACAGTTAA ACTTGCCATC
TCATATTCTA CCAATTTGAA GGTAACTAAG AGATTCTCCA TAACCGGAAC TCACACATGT
TCTTCCGCTA ATGGAGCAGG CGTTAGATTG TTCTACAGAC CAGGGGTTCT AGAAGTTATA
CCAAAGACCA GAAATATAAT AGTTGATGGG CTCAGAAGAT ACATGTTCAA TGAAGTCTGG
CAACCGCTCA AGGCTATTAA ACATCTTGTT GATACTGCTC CTATATTCTA TTGCGGAACA
GAAGATAAAA TGAATCTAAG ATGTGGATCT CCAACAATTA CGTATGTTGA CAAAAATGGA
AACGATTTCA AGTCAACAAA TTATGAACAT TAA
 
Protein sequence
MKLRTVYLFT IGAITVPIYA NFFANKITEI DITNKYFLPG INLDLLGDDA DYTKINLDAQ 
RYEEDVQEFS KHIVALRDKD TEFTAQETII DLTDTDDSIN FSQITKYKLS RREDLNEARM
NYILETNPKG VVVFEDTKKV LVADPNDILY KSNDELKRRV EAGEKFKYTE VDLGNDFESQ
ITYEPIMVPL TGCLKFPLGR GTGSVAFSYS VGLEMNINGE GGISYSPSQT EQNITVKLAI
SYSTNLKVTK RFSITGTHTC SSANGAGVRL FYRPGVLEVI PKTRNIIVDG LRRYMFNEVW
QPLKAIKHLV DTAPIFYCGT EDKMNLRCGS PTITYVDKNG NDFKSTNYEH