Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32045 |
Symbol | |
ID | 4839254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 548046 |
End bp | 549098 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 12 |
GC content | 37% |
IMG OID | 640390569 |
Product | predicted protein |
Protein accession | XP_001385118 |
Protein GI | 150865771 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.621842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTTC GAACTGTCTA TCTATTTACA ATTGGAGCAA TCACTGTTCC TATCTATGCC AATTTCTTTG CTAACAAGAT CACTGAAATC GATATAACTA ACAAATACTT TCTTCCCGGG ATCAACCTAG ACTTACTTGG TGACGATGCT GACTACACCA AAATTAATTT GGATGCCCAG AGATATGAAG AAGACGTGCA AGAGTTCAGT AAACATATTG TTGCTCTTCG CGATAAAGAT ACGGAATTCA CTGCTCAAGA AACAATAATT GATTTGACAG ACACTGATGA TCTGATTAAT TTTTCCCAAA TAACGAAGTA TAAATTGAGT CGCCGTGAAG ATTTAAATGA AGCAAGAATG AACTATATTC TTGAAACGAA TCCCAAGGGC GTGGTAGTCT TTGAAGATAC TAAAAAGGTT TTAGTTGCCG ATCCCAACGA TATTCTCTAT AAGAGTAATG ACGAGCTAAA AAGAAGAGTC GAAGCTGGGG AAAAGTTCAA ATATACAGAA GTTGATTTAG GCAATGATTT TGAGAGCCAA ATCACATACG AACCAATAAT GGTTCCATTA ACTGGATGTT TAAAGTTTCC ATTGGGAAGA GGAACAGGTT CTGTAGCCTT CTCTTACAGC GTCGGGCTTG AAATGAACAT TAACGGTGAA GGTGGAATTT CATACTCACC TTCTCAAACT GAACAGAATA TCACAGTTAA ACTTGCCATC TCATATTCTA CCAATTTGAA GGTAACTAAG AGATTCTCCA TAACCGGAAC TCACACATGT TCTTCCGCTA ATGGAGCAGG CGTTAGATTG TTCTACAGAC CAGGGGTTCT AGAAGTTATA CCAAAGACCA GAAATATAAT AGTTGATGGG CTCAGAAGAT ACATGTTCAA TGAAGTCTGG CAACCGCTCA AGGCTATTAA ACATCTTGTT GATACTGCTC CTATATTCTA TTGCGGAACA GAAGATAAAA TGAATCTAAG ATGTGGATCT CCAACAATTA CGTATGTTGA CAAAAATGGA AACGATTTCA AGTCAACAAA TTATGAACAT TAA
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Protein sequence | MKLRTVYLFT IGAITVPIYA NFFANKITEI DITNKYFLPG INLDLLGDDA DYTKINLDAQ RYEEDVQEFS KHIVALRDKD TEFTAQETII DLTDTDDSIN FSQITKYKLS RREDLNEARM NYILETNPKG VVVFEDTKKV LVADPNDILY KSNDELKRRV EAGEKFKYTE VDLGNDFESQ ITYEPIMVPL TGCLKFPLGR GTGSVAFSYS VGLEMNINGE GGISYSPSQT EQNITVKLAI SYSTNLKVTK RFSITGTHTC SSANGAGVRL FYRPGVLEVI PKTRNIIVDG LRRYMFNEVW QPLKAIKHLV DTAPIFYCGT EDKMNLRCGS PTITYVDKNG NDFKSTNYEH
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