Gene PICST_32035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32035 
Symbol 
ID4839133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp522726 
End bp523475 
Gene Length750 bp 
Protein Length249 aa 
Translation table12 
GC content41% 
IMG OID640390448 
Producthypothetical protein 
Protein accessionXP_001385116 
Protein GI150865769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0211397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.429741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCA ACGCCTATTT ACAGTCATTT GGCTGGACAG AGGGAGAAGC TCTTCAAAAG 
GGCGGACTCA AAAAGCCAAT TTTGGTGAAA CACAAGAAAG ATACCAAGGG GTTGGGTCAT
GATACAAAAG ATACTGATGT ATGGTGGGAA AAGCTCTTTG ATGGTCAACT TAAGAGTATG
GAAGTCAGCG GAAGTGGAAG TTCCATCTCT ATCACACAGA ACCAGACTTT GGTTGTAGAT
CATATGAGAA GAGAAACTTC GGCTCTCTAC AAAATGTTTG TGAAAGGTGT AGGGTTGGAA
GGTACTGTGG GGAAAACCAG CTACAGCAAT GCAAAAGACC ATATTGACAG AGACGAGGTA
GCGAAAGTGA TAGATAAGGC TTTCGGTACT ATTTCCAAGG AGGACAAGAA GGAGAAGAAG
AAGAAGGACA AGAAGAAGGA GAAAAAGACC AAGAAGGACA AATCAAACAA GGTCGAAAAG
AAGGACAATT TAAATAAAAG AGAGAAGACA GGAAAAGTAA GCAAAAAGGA CAAGAAAGAC
AAAATAGACA GAGAAGGAGT TTCAAAAAAG AATGAAAAGA AGGCCACGAA AGAAGACTTG
GTTCTGGAGT CAAAGTCTAA GTCCAAGAAG TCGGACAAGA AGGACAAGAA AGAAAAGAAA
GAAAAGAGCC CTAAAGAAAC CAAGTCAAAG AAACGTAGAC TTGATTCTAA CGAGAGCGAA
GGTTCGAAGA AGCGAAGAAG AGAACTCTGA
 
Protein sequence
MNANAYLQSF GWTEGEALQK GGLKKPILVK HKKDTKGLGH DTKDTDVWWE KLFDGQLKSM 
EVSGSGSSIS ITQNQTLVVD HMRRETSALY KMFVKGVGLE GTVGKTSYSN AKDHIDRDEV
AKVIDKAFGT ISKEDKKEKK KKDKKKEKKT KKDKSNKVEK KDNLNKREKT GKVSKKDKKD
KIDREGVSKK NEKKATKEDL VSESKSKSKK SDKKDKKEKK EKSPKETKSK KRRLDSNESE
GSKKRRREL