Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32028 |
Symbol | |
ID | 4839130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 509532 |
End bp | 509993 |
Gene Length | 462 bp |
Protein Length | 154 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640390445 |
Product | predicted protein |
Protein accession | XP_001384759 |
Protein GI | 126136471 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.310329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0938629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCCGC CCAGTTCCGG CGGTTTCGAA GCAGCTGTGC CTGACTTCCA TATTAGCAAC TATTCCAAGG GAGAGAAGTA CTCCAGCAGA ACCGGAGTAG GAGCCTTACC AAATTTACCC TACTCTTTAC CTGTGGGATC TCCATCCGGA AGTAGCAATC ACAATAACGA CGATGAGTTG AATTCTCCTA ACCATCTTTC TCCAGAAAAC AGCTATGTAG AGTTTGATTT AAGTCACATG AATGGACCAT ACAGCAACAG ATATGGAAAC GGTACTGGAA CTTCTGAAGA TCTCAACAGT TTTGTTAGTG AAAAACGAGT GACAAGTACG AGCAGATTGG GTTCTGCTGA AACAAGTCCC TTGAATGTTA GAGATTCTCT ACCCGGACTT GATGATATAC TTGGAGAAGA CGTCACCATT GAAGTAGATG ATATCAATTT CAAAGACAAA GAAAATGAGC CG
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Protein sequence | MYPPSSGGFE AAVPDFHISN YSKGEKYSSR TGVGALPNLP YSLPVGSPSG SSNHNNDDEL NSPNHLSPEN SYVEFDLSHM NGPYSNRYGN GTGTSEDLNS FVSEKRVTST SRLGSAETSP LNVRDSLPGL DDILGEDVTI EVDDINFKDK ENEP
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