Gene PICST_32028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32028 
Symbol 
ID4839130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp509532 
End bp509993 
Gene Length462 bp 
Protein Length154 aa 
Translation table12 
GC content43% 
IMG OID640390445 
Productpredicted protein 
Protein accessionXP_001384759 
Protein GI126136471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.310329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0938629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCCGC CCAGTTCCGG CGGTTTCGAA GCAGCTGTGC CTGACTTCCA TATTAGCAAC 
TATTCCAAGG GAGAGAAGTA CTCCAGCAGA ACCGGAGTAG GAGCCTTACC AAATTTACCC
TACTCTTTAC CTGTGGGATC TCCATCCGGA AGTAGCAATC ACAATAACGA CGATGAGTTG
AATTCTCCTA ACCATCTTTC TCCAGAAAAC AGCTATGTAG AGTTTGATTT AAGTCACATG
AATGGACCAT ACAGCAACAG ATATGGAAAC GGTACTGGAA CTTCTGAAGA TCTCAACAGT
TTTGTTAGTG AAAAACGAGT GACAAGTACG AGCAGATTGG GTTCTGCTGA AACAAGTCCC
TTGAATGTTA GAGATTCTCT ACCCGGACTT GATGATATAC TTGGAGAAGA CGTCACCATT
GAAGTAGATG ATATCAATTT CAAAGACAAA GAAAATGAGC CG
 
Protein sequence
MYPPSSGGFE AAVPDFHISN YSKGEKYSSR TGVGALPNLP YSLPVGSPSG SSNHNNDDEL 
NSPNHLSPEN SYVEFDLSHM NGPYSNRYGN GTGTSEDLNS FVSEKRVTST SRLGSAETSP
LNVRDSLPGL DDILGEDVTI EVDDINFKDK ENEP