| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32017 |
|---|
| Symbol | CRC1 |
|---|
| ID | 4839516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | - |
|---|
| Start bp | 479427 |
|---|
| End bp | 480281 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640390831 |
|---|
| Product | Mitochondrial carnitine carrier |
|---|
| Protein accession | XP_001385105 |
|---|
| Protein GI | 126137163 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0367083 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAAG TTGATACTAT GTTGGTAGAC AACGTTAAGT CGTTTGCCGC CGGTGGCTTT
GGTGGTATTT GTGCCGTTTT GACGGGACAT CCGTTTGATT TGGTTAAGGT TCGTTTGCAG
ACTGGAATGT ACTCGTCGGC CATCCAGTGT GTGAAACAAA CCGTGGTTAA GGATGGTCTT
TTCGGGCTTT ACAGAGGTGT TTTACCACCC CTTTTGGGTG TCACTCCCAT GTTTGCCGTT
TCTTTCTGGG GTTACGATGT GGGTAAGAAA ATTGTCACCA GCTACTCAGG AGTATCTGCT
GATAAGTTTT CTGTGGCCCA GATCTCTACT GCTGGTTTCA TTTCTGCCAT TCCTACTACT
CTTGTTGCAG CTCCATTTGA GAGAATCAAG GTCATGATGC AAATTCAGGA AGGTAAGACA
GGTGTCTCTA TGGGTTCCGT AGTAAAGGAA ATGTACAGGA CTGGTGGTAT CAGATCCATT
TTCAAGGGTT CTGCTGCTAC GTTGGCCAGA GACGGTCCAG GTTCGGCTTT ATACTTCGCT
ACCTACGAGA TCTTGAAGGA AAAGTTATCC ACCCCAGGAA AGGACTTGTC TTTGGGTGCT
ATTTCTACTG CTGGTGGTTT TGCTGGTGTT TCTATGTGGT TGGGTGTTTT CCCAATCGAC
ACTATCAAAT CGACACAACA ATCTTCTAAC GTCAGCGTTT CGATTCTCCA GACAACCAAG
AACATCTATG CGAAGGGAGG AATCAAGGCA TTCTTTCCTG GTGTTGGTCC AGCCTTGGCT
AGATCATTCC CAGCCAATGC AGCCACTTTC GTCGGTGTCG AATTGGCCAG AGACTTCTTG
AACAAGATTG TCTAA
|
|---|
| Protein sequence | MDEVDTMLVD NVKSFAAGGF GGICAVLTGH PFDLVKVRLQ TGMYSSAIQC VKQTVVKDGL
FGLYRGVLPP LLGVTPMFAV SFWGYDVGKK IVTSYSGVSA DKFSVAQIST AGFISAIPTT
LVAAPFERIK VMMQIQEGKT GVSMGSVVKE MYRTGGIRSI FKGSAATLAR DGPGSALYFA
TYEILKEKLS TPGKDLSLGA ISTAGGFAGV SMWLGVFPID TIKSTQQSSN VSVSILQTTK
NIYAKGGIKA FFPGVGPALA RSFPANAATF VGVELARDFL NKIV
|
|---|
| |