Gene PICST_31986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31986 
Symbol 
ID4839682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp402608 
End bp403261 
Gene Length654 bp 
Protein Length217 aa 
Translation table12 
GC content43% 
IMG OID640390997 
Productpredicted protein 
Protein accessionXP_001385090 
Protein GI126137133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00722102 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAG ATATACAACT CACCAATCTT CCAAAACACC ATGACTTGGA AAAGTCCACA 
CCGTTGACGG TTATAGACTC TAACACGTCC AATCTCAACC TCCACTTCCA TCCGATGGCT
CGTAGCGTTC ATCGTAAGCT TGTAATCTAT TTGGTTGTGG AAGCTGTTGT ATCGTTGACA
ATATATTTCA ACTACGATAA ATTGTGCAAC TTCAATGGCG TTCTTGGTCC AGCTCTTCTT
GGATCATCAA CAGCTGCAAT GGCTCAGTCG ATCAACCAGT ACTCCAAGAT GAAGTTCAAC
CTTAGTAAAG TGTTCCAATT CATGGTCTGG GGAGCCATAA ACGGCTACTT CACAGTCGTG
TGGATCGATA CGTTGATTGT TAAGGTGGAC AACTTGGTGT ATAGAATTAT TGTAGACCAA
GCAGTAGGCG CTCCGCTCTT CCAGCTTGTG TTCAATATCC TTAATAGTCT TTGGGACCAC
GGAGAAATCT CGGCACACAC CAGATCTTCA TATATCAAGT CGTTGAAGTA CAGTTATTGC
TTCTGGCCGT TTGTTTCTGT GTGTATCTTC GTTTTCATTC CTCAAGTGAT GATGTTCCCA
TGCAACTGTA TGGCAAATTT GTTGTGGAAC ATGATTTTGA GCAGATTAGT GTGA
 
Protein sequence
MSADIQLTNL PKHHDLEKST PLTVIDSNTS NLNLHFHPMA RSVHRKLVIY LVVEAVVSLT 
IYFNYDKLCN FNGVLGPALL GSSTAAMAQS INQYSKMKFN LSKVFQFMVW GAINGYFTVV
WIDTLIVKVD NLVYRIIVDQ AVGAPLFQLV FNILNSLWDH GEISAHTRSS YIKSLKYSYC
FWPFVSVCIF VFIPQVMMFP CNCMANLLWN MILSRLV