Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31986 |
Symbol | |
ID | 4839682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 402608 |
End bp | 403261 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640390997 |
Product | predicted protein |
Protein accession | XP_001385090 |
Protein GI | 126137133 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00722102 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAG ATATACAACT CACCAATCTT CCAAAACACC ATGACTTGGA AAAGTCCACA CCGTTGACGG TTATAGACTC TAACACGTCC AATCTCAACC TCCACTTCCA TCCGATGGCT CGTAGCGTTC ATCGTAAGCT TGTAATCTAT TTGGTTGTGG AAGCTGTTGT ATCGTTGACA ATATATTTCA ACTACGATAA ATTGTGCAAC TTCAATGGCG TTCTTGGTCC AGCTCTTCTT GGATCATCAA CAGCTGCAAT GGCTCAGTCG ATCAACCAGT ACTCCAAGAT GAAGTTCAAC CTTAGTAAAG TGTTCCAATT CATGGTCTGG GGAGCCATAA ACGGCTACTT CACAGTCGTG TGGATCGATA CGTTGATTGT TAAGGTGGAC AACTTGGTGT ATAGAATTAT TGTAGACCAA GCAGTAGGCG CTCCGCTCTT CCAGCTTGTG TTCAATATCC TTAATAGTCT TTGGGACCAC GGAGAAATCT CGGCACACAC CAGATCTTCA TATATCAAGT CGTTGAAGTA CAGTTATTGC TTCTGGCCGT TTGTTTCTGT GTGTATCTTC GTTTTCATTC CTCAAGTGAT GATGTTCCCA TGCAACTGTA TGGCAAATTT GTTGTGGAAC ATGATTTTGA GCAGATTAGT GTGA
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Protein sequence | MSADIQLTNL PKHHDLEKST PLTVIDSNTS NLNLHFHPMA RSVHRKLVIY LVVEAVVSLT IYFNYDKLCN FNGVLGPALL GSSTAAMAQS INQYSKMKFN LSKVFQFMVW GAINGYFTVV WIDTLIVKVD NLVYRIIVDQ AVGAPLFQLV FNILNSLWDH GEISAHTRSS YIKSLKYSYC FWPFVSVCIF VFIPQVMMFP CNCMANLLWN MILSRLV
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