Gene PICST_31958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31958 
SymbolOYE2.4 
ID4839393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp314798 
End bp316009 
Gene Length1212 bp 
Protein Length403 aa 
Translation table12 
GC content46% 
IMG OID640390708 
ProductNAPDH dehydrogenase (old yellow enzyme), isoform 2 
Protein accessionXP_001385077 
Protein GI150865741 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.19959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCGA ACAGGGCTCT AGCAACCACC AAGCTCTTCA AGCCTCTAAG AGTAGGAACC 
AATGAGCTTT CTCACCGTGT AGTGTTTGCT CCAACAACGA GAGTCCGGGC TCTGGATGAC
CATACTCCTA CTGACTTGAT GCTTCAGCAC TACGACGAGA GGTCGAGATT TGCTGGAACT
TTGGTGATAG TAGAAGCGAC TTTTCCAACT GACAAGGGAG CCTTGGATGT TCATATTCCA
GGACTCTGGT CAAAGGAACA TATTGTAGCT TGGAAAAGGA TAAACGACAA GATCCATGCG
AACAAGTCGT TTTCGTCAGT ACAGTTGTGG ATGTTGGGAA GAGTGGCCGA TCCAGCAGTT
CTCAAAAGAA GACATCTACC TTATGTTGGA GTTTCCCCCA TCTACCATAG TGAAGAAGCT
AGGAAGATTG CACATCAGTC CGGTAATCTT CTCAGGGAAT ACACTCAAGA TGAGTTGCAC
CAGCTTATAT ATGAAAGTTT TGCAAACTCA GCTAGGAGTG CAATAGAGGC AGGGTTTGAC
TACGTAGAGG TCCATTGTGC CTATGGCTAT TTGGGAGATC AGTTTCTTCA GCCCTGTTCC
AACCAGAGAA CAGATGAATA CGGAGGCTCC ATCGAGAACA GAGCGAGATT CGTATTGGAG
TTAATAGACC ATTTGGTGTC TGTAGTGGGT GCTCATAGAT TGGCAATCAG GGTTTCTCCT
TGGGGAAAGG GCCAAGGCAT GAAAGGCGCA GATGATGTTG TTCATCCAAT TACAACCTTC
AGCTACTTGC TTAATGAACT TCAGAAAAGA GCGAATTTTG GCCATGAACT AGCTTATGTC
TCGTTAGTTG AACCCCGAGG TCCACCACCC AAGGATCCTT TGGAGGTATA CCAACTTCCT
AGCAATGCGT TTGCTTCCAA AATATGGAAG GGTGTCTTTG TCAAGGCTAA CTACACCTAC
GATGCACCAA ACTTCGAGGC TCTCCAGAGA GATATAGAAG ACGACAGGAC GTTGGTAGGG
TTCTCGAGGT ATTTCACCAG TAACCCCGAT CTTGTGGAAA GACTCCGTGA TGGTCTACAG
CTCGCAGAAT ACGACGAAGA CACTTTCTAC CAGTGGAATA ACTGGGGCTA CAATACTTGG
AACGAGCACG GGCACCGGAG ACATTATGAT GAAGAAAAGG AGAAGAAAAG AGTGCCAAAA
ATTATAAAAT AG
 
Protein sequence
MPANRALATT KLFKPLRVGT NELSHRVVFA PTTRVRASDD HTPTDLMLQH YDERSRFAGT 
LVIVEATFPT DKGALDVHIP GLWSKEHIVA WKRINDKIHA NKSFSSVQLW MLGRVADPAV
LKRRHLPYVG VSPIYHSEEA RKIAHQSGNL LREYTQDELH QLIYESFANS ARSAIEAGFD
YVEVHCAYGY LGDQFLQPCS NQRTDEYGGS IENRARFVLE LIDHLVSVVG AHRLAIRVSP
WGKGQGMKGA DDVVHPITTF SYLLNELQKR ANFGHELAYV SLVEPRGPPP KDPLEVYQLP
SNAFASKIWK GVFVKANYTY DAPNFEALQR DIEDDRTLVG FSRYFTSNPD LVERLRDGLQ
LAEYDEDTFY QWNNWGYNTW NEHGHRRHYD EEKEKKRVPK IIK