Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31956 |
Symbol | |
ID | 4839511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 312185 |
End bp | 313093 |
Gene Length | 909 bp |
Protein Length | 303 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640390826 |
Product | predicted protein |
Protein accession | XP_001384721 |
Protein GI | 150865485 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0602966 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTGT ACAAGTTTGC TATCGACTAT TGCTACAATG GACCCGTAAA TAAGATTACT ACTTTAGTTG ACTCTGTTAT GACGTTTGTG AGCCCACAGG AAGGAGAAAG TTCTACCTCT ACTATTTGTG CTAAAGATAA GACTAGAGTC GACACTTCTG CAAAAGAAGA ACAAATTCAA GACCAATTTG AAGTTGTGAA TGCAGAAGAC TATGCCCTGG CAACTGAGAC TATTACCACG GCACCTCCTT CGTCTGCCGG TTCAAGTTCT AAGAGAAAAT ATAGGAAAAA GAAAAAGAAC AGGAAGAGAA GACATGGCAA AATATATGCT TCCATCCTGC CAGTGCCATT TCCAAAGTCT GGTGAAGAAA GCATTTTTGA AGCCGTCCAG GAAGATTCAA CGGAAGAACC AACTGAAGAG GAGCTTGCCT CCTTAGAAGG ACTGAGCTTT TTTGAAAAGC AGAAAGCCGC ATTCGATAGC TTCAACAAAC TTCTGGTTCT TTCCAAAACA ATTGAAGATT CGGAGTGGTT AGACAAAGAA GATATAATAC ATCCCAAGAG CGGTATGCCA AGGGACATCT TCCAGGCCAT GAAATTAGGG GAAAGTCCAT TTCAGATGCC CCCTCAGCCT TTGGTACAAG ATGTTAAAGC AATAGGGTTG CAACCCCCGC TTCAGACAAT CGAACAAGCA GTAGCAGATG CTGCTGCTTC CGAACCAAAG CCAACAAAAG AGGCAGCCAA AGAAAGCAAG ATGGCGTTGT TGCGAGAGAT TTTGCCAACA AGCTTCTTTG AAACCCCCAG ACGAGAGTTC CAATACAGAA AGACATCGAA GATGGAAGAG ATTTTTCAAT CTATGGAACT TGGTGGAAGA ACAAACCCAC CTCGTTATTT GATTCAACAA AATGGAAGG
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Protein sequence | MSVYKFAIDY CYNGPVNKIT TLVDSVMTFV SPQEGESSTS TICAKDKTRV DTSAKEEQIQ DQFEVVNAED YASATETITT APPSSAGSSS KRKYRKKKKN RKRRHGKIYA SISPVPFPKS GEESIFEAVQ EDSTEEPTEE ELASLEGSSF FEKQKAAFDS FNKLSVLSKT IEDSEWLDKE DIIHPKSGMP RDIFQAMKLG ESPFQMPPQP LVQDVKAIGL QPPLQTIEQA VADAAASEPK PTKEAAKESK MALLREILPT SFFETPRREF QYRKTSKMEE IFQSMELGGR TNPPRYLIQQ NGR
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