Gene PICST_31956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31956 
Symbol 
ID4839511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp312185 
End bp313093 
Gene Length909 bp 
Protein Length303 aa 
Translation table12 
GC content43% 
IMG OID640390826 
Productpredicted protein 
Protein accessionXP_001384721 
Protein GI150865485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0602966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTGT ACAAGTTTGC TATCGACTAT TGCTACAATG GACCCGTAAA TAAGATTACT 
ACTTTAGTTG ACTCTGTTAT GACGTTTGTG AGCCCACAGG AAGGAGAAAG TTCTACCTCT
ACTATTTGTG CTAAAGATAA GACTAGAGTC GACACTTCTG CAAAAGAAGA ACAAATTCAA
GACCAATTTG AAGTTGTGAA TGCAGAAGAC TATGCCCTGG CAACTGAGAC TATTACCACG
GCACCTCCTT CGTCTGCCGG TTCAAGTTCT AAGAGAAAAT ATAGGAAAAA GAAAAAGAAC
AGGAAGAGAA GACATGGCAA AATATATGCT TCCATCCTGC CAGTGCCATT TCCAAAGTCT
GGTGAAGAAA GCATTTTTGA AGCCGTCCAG GAAGATTCAA CGGAAGAACC AACTGAAGAG
GAGCTTGCCT CCTTAGAAGG ACTGAGCTTT TTTGAAAAGC AGAAAGCCGC ATTCGATAGC
TTCAACAAAC TTCTGGTTCT TTCCAAAACA ATTGAAGATT CGGAGTGGTT AGACAAAGAA
GATATAATAC ATCCCAAGAG CGGTATGCCA AGGGACATCT TCCAGGCCAT GAAATTAGGG
GAAAGTCCAT TTCAGATGCC CCCTCAGCCT TTGGTACAAG ATGTTAAAGC AATAGGGTTG
CAACCCCCGC TTCAGACAAT CGAACAAGCA GTAGCAGATG CTGCTGCTTC CGAACCAAAG
CCAACAAAAG AGGCAGCCAA AGAAAGCAAG ATGGCGTTGT TGCGAGAGAT TTTGCCAACA
AGCTTCTTTG AAACCCCCAG ACGAGAGTTC CAATACAGAA AGACATCGAA GATGGAAGAG
ATTTTTCAAT CTATGGAACT TGGTGGAAGA ACAAACCCAC CTCGTTATTT GATTCAACAA
AATGGAAGG
 
Protein sequence
MSVYKFAIDY CYNGPVNKIT TLVDSVMTFV SPQEGESSTS TICAKDKTRV DTSAKEEQIQ 
DQFEVVNAED YASATETITT APPSSAGSSS KRKYRKKKKN RKRRHGKIYA SISPVPFPKS
GEESIFEAVQ EDSTEEPTEE ELASLEGSSF FEKQKAAFDS FNKLSVLSKT IEDSEWLDKE
DIIHPKSGMP RDIFQAMKLG ESPFQMPPQP LVQDVKAIGL QPPLQTIEQA VADAAASEPK
PTKEAAKESK MALLREILPT SFFETPRREF QYRKTSKMEE IFQSMELGGR TNPPRYLIQQ
NGR