| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31938 |
|---|
| Symbol | CTA1 |
|---|
| ID | 4839674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | + |
|---|
| Start bp | 264786 |
|---|
| End bp | 265398 |
|---|
| Gene Length | 613 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640390989 |
|---|
| Product | cofilin/tropomyosin-type actin-binding protein |
|---|
| Protein accession | XP_001384708 |
|---|
| Protein GI | 150865475 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.448427 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAGTC CTTTCGGCTC GTACAATTCG TCCAATGTAT ACTAACCTGT ATTTCAGTCT
TCGTTATACC TGTTCTCCTC GGAGACTTTG TCTGCTCTCC GAAAGTTCAG ATTTGGCTCC
GCCAGAGCCT CCACAATGCA AGCAGTGATA TGTATGTGAA CCAGAAACTG CTCCACAATG
GGGGTACAAT GTTGATCCTG AATTGCTTAT TATTCTAGAC AATTTTCACC GCCCTTATAC
TAACTTCTGC AGATGCCATA GACAACGAAT CCTATGAGAT CAAATCCGAC GGAGAAATCA
TCACTTCCAC CGAAGAATTG GTCGAAGAAT TACCGGACAA TTCCCCGCGC TATGTCGTGC
TCTCTTACCC CTTCAAGACC CCGGACGGCC GTTTGAAAAC TCCATTGGTT CTCTTATACT
GGATGCCTCC TACTTCAAGC CAGGAAACTA GAATGTTGTA TGCAGGGGCT GTTGAAGAGT
TCAGAGAGAA GGCTGGTGTT TCTAAGTATG TACCACTAGA GAAAGAGATA GAAAGAGTAT
TACTAACATT AACAGACTCA TCAAGGTCGA AGATGAAGAT GATTTCGAAG ACCTCGAAGA
ACAGTTGCAA TAG
|
|---|
| Protein sequence | MSSLYSFSSE TLSALRKFRF GSARASTMQA VIYAIDNESY EIKSDGEIIT STEELVEELP
DNSPRYVVLS YPFKTPDGRL KTPLVLLYWM PPTSSQETRM LYAGAVEEFR EKAGVSKLIK
VEDEDDFEDL EEQLQ
|
|---|
| |