Gene PICST_31932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31932 
Symbol 
ID4839477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp251157 
End bp253076 
Gene Length1920 bp 
Protein Length639 aa 
Translation table12 
GC content45% 
IMG OID640390792 
Productpredicted protein 
Protein accessionXP_001385065 
Protein GI150865730 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGA CAAAGAGAGA CTTTCTAGAT CTATCAGCAG ATTCAACTTT TGGTTCCACA 
GCCTTCAATC TAGGCAAAGA CCCTCTCTTG CACCAATTGG AACAAGTAAG AGAATACAGT
GAACAGGATC TTCTAGCCAA TATGATTTAC ATTTTTCTTC TCTTGGTGTT CGCAACGGTG
GTACTAGGGG CTGTTTCTTT TGGAGTCAGA GAGTACTACT TGTCAATGAA GAGCAAGTTG
GATACAGCAA CTAGCCCTTT TACGCCGCAG GCTGAGGATG AAATTTGGAA TGCTCGTAAT
GACCAGATAC AGACAACACC AGCATTACCT GAATCAAACG CTCCTTCTTC CAATTTGAAA
CAATTGCCCA TGGAGTCGGA AGAAAGTCAA AATCGACTTT CAGAGAACTC GTTGGCTTCA
GGATTCACTC ATTTCACAGA GAACAGAGTC CAGCTGCAAA AAAATCACAC TATAGAAGAA
ACAGAATCTA GTAACCAGGG CCTTTCCGGA TCTTTAGAAC AGGTGACGGA GCTTGAGAAA
ATCCAAATCT TTCGTGATGA TATCGAATCT CCAGGCTTGA AACACTTTAT GTCTGCTGAT
ATTAGCAAGG GAGAGAACTT ATTATCTGAA AAAGATTCGC CGCAAGAGCC ACTGCCACCT
CCACCACCTC CGCCTACAAG AGTGAGAACC AAATCCAAGA CCAACAAAAA GACTACTTAT
AGTATTAGCC ATCTTCTTAG TCTCAACAGT GACATCCTGA CCAAATACTT AACTCACAGA
CTTAAGAGTC GGTCGATCAA GATGTCAAAG ATATTGCGGT ATTCGGCAGA TATTCCTGCC
ACAGAGTTTG AAACTGCCTG GAATGCTAAC AAGAGTGTGA ATGATGCCAG AGCAAAGCTT
GAGATGAACG AAGCTGGTGA TTCAGACTTC GAGACAGACT CAGACGCAGG CTCTGATTAT
GGCGACAAGA ACAAGTGCAC AGGTTGCATA GCTGTTCTTC AGTTATTATC TATAGGAGTG
TCTGATCCCA TTTTGGGCAA CCCCAACTAC TTCTTACCAG CCTTTAATGA TTTGATAGAG
CATCTTATAG ACACTGGACA AGTATTCCAA GTGCTTGTCT ACAGCGTTCG TTCACATTCA
CAGCTACTTC TTCTTGAAAT GATGTTGATC TATTGCTGGT CCCATTGGAA TTACCGTAGC
AACGACTCGA GCGCTATTCA ACGCCAGTTT CAAAAGTGGA ACTTGGTAGA GCCTGTTGTT
CGCAGCCGAG ACACCATATT CAGGTATCTC TGCAACCTTC AGTTAGGACT AGCTGCCAAT
TATACTGAGA TTTCACTCTC GTCCACTCCA TCTTTCATTA ACGAAGGAGA GTTCCGTATC
CACTTACTCT TGAGAGAAGC CGTCAAGTCC TTCTGCAACG ATTACATGCA ATTCATCCCC
ATGATAGCGC AAGCTGTAGA TGTAGCACAG TTGCACAATA CAAAGGTGCT ATTCTACGAT
CTCCTCCATG TTCTTCTCCA GAAGCACAGC CAATGTTGCA TGGCCGAGTA CTTACTGGAA
GATAATACTG ATCTCAAGGC TTTGGTTCAA CACGGTCTTT GGCACAAACA CAACCACCGT
TTGCACAAGT ACTCGTACCG AATTCTCCAC TTCTTGCTAG AACAAGGCGA CCACAATCTA
GTAGAGCTGT GGGAAAGACA AGTAGAAGGA GGCAAGCTCT ACGTTCCTTC CGCTGGTGTT
GTCGCTAATG CTACAGTCTC GGCCAATTCT CCGCAACAAC TGCTGGGAAT CAACATGTAT
GCCACAGCAC TCCAGAAACC AATTACGCCT GGAGGTTTGA GCTACGGACT TCTTAGTGGG
CTTGTCTATG GAACCCAGCG GCATTCGAGT ATGCGCCGTA AGCTTGCAAG AGAGTTGTGA
 
Protein sequence
MTWTKRDFLD LSADSTFGST AFNLGKDPLL HQLEQVREYS EQDLLANMIY IFLLLVFATV 
VLGAVSFGVR EYYLSMKSKL DTATSPFTPQ AEDEIWNARN DQIQTTPALP ESNAPSSNLK
QLPMESEESQ NRLSENSLAS GFTHFTENRV QSQKNHTIEE TESSNQGLSG SLEQVTELEK
IQIFRDDIES PGLKHFMSAD ISKGENLLSE KDSPQEPSPP PPPPPTRVRT KSKTNKKTTY
SISHLLSLNS DISTKYLTHR LKSRSIKMSK ILRYSADIPA TEFETAWNAN KSVNDARAKL
EMNEAGDSDF ETDSDAGSDY GDKNKCTGCI AVLQLLSIGV SDPILGNPNY FLPAFNDLIE
HLIDTGQVFQ VLVYSVRSHS QLLLLEMMLI YCWSHWNYRS NDSSAIQRQF QKWNLVEPVV
RSRDTIFRYL CNLQLGLAAN YTEISLSSTP SFINEGEFRI HLLLREAVKS FCNDYMQFIP
MIAQAVDVAQ LHNTKVLFYD LLHVLLQKHS QCCMAEYLSE DNTDLKALVQ HGLWHKHNHR
LHKYSYRILH FLLEQGDHNL VESWERQVEG GKLYVPSAGV VANATVSANS PQQSSGINMY
ATALQKPITP GGLSYGLLSG LVYGTQRHSS MRRKLAREL