Gene PICST_31918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31918 
Symbol 
ID4839470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp211168 
End bp212229 
Gene Length1062 bp 
Protein Length353 aa 
Translation table12 
GC content42% 
IMG OID640390785 
Producthypothetical protein 
Protein accessionXP_001385058 
Protein GI150865725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.386059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCG CTATACTATT CCTTTCGTTA ATTATATCCT CGTTTGCTGA AAGCATACCG 
GTGGAAACAC AGGTTCCAAC TGTTAGACAT CACCATCACC ATAACCATCA CAAAGATCGT
CAACAGATTT TGGTTGATAT AGGCTCGCCA GCTCCTACTA TTGCTTTGGT ACAGAGAGAT
GGTTCAATGC CAACCATAAC CGGGAAACCT ACCTTAGCAG CAACCTCGTC CGCAACCTCC
TCCTCATCCA CAACTTCCTA CTCATATAGC ATAGCGATAC CTGTAGGCAA CGAAAAACTG
TCTGGTTCCC CATCTAATCC TTACATCTAT TCCTCATCGC TACCAGACAA TCTCGTGTTT
ATTGTCGTTG GTGCGATTGC AGGATTACTA TTGATCATAC TTATCTTATT TCGACTCATT
ACTTGGATAA TCGCTAGACG CAGAGCAAAG AGCGAAAAAG AAGTATACTT TGCAAATTTC
AACAGCGGTG GCTTTTATGC TGGCAGCAGC AGTGCCAGTT CTTTCAATGG ACTTACAACT
CCTTCCAATT CGTCATTTTT GGAAAAGGCG TCCATGGCTT CTACCTCCAA TTTACTCTTA
TCCAAGCATA ATTCTATTAT ACAATCGCAT TTTGAAGATA GCAGCAATTC CAGCAGCAGT
CAGCAAGGTA GATCTTACCG TGACGCTGTC ATGGGTAATA ATAACAGCAA CGCGAATCTC
AGCAACGCTA ATAAGCGTGG TTCGATGTTC ATAAGTCCTG TGTTAGAAGT CATGCATAGC
AGAAGTGCAT CCCAATTAGA ATTGCCGTTG TATCATAAAA GCATATTCCA AGCTCCAAAT
GGAAGTGTAC TATCATTACT AGACCCCGGT ACACCTACGT CTACAAACAA CAATGACTCT
CTAAACTACG ACATATACGG AGCTGAGAAG TTCAACTTGT TGCAGAACTA CACCAATAGT
GACATTGAGC TGAATGGTGA GCTGGTCAAG CCACAACAAC AACCAAAACG CTCGAGACCT
CCAAGTCAGT ATCTTGAAGA CTTGTTAAAT GGTGAATTGT AG
 
Protein sequence
MNVAILFLSL IISSFAESIP VETQVPTVRH HHHHNHHKDR QQILVDIGSP APTIALVQRD 
GSMPTITGKP TLAATSSATS SSSTTSYSYS IAIPVGNEKS SGSPSNPYIY SSSLPDNLVF
IVVGAIAGLL LIILILFRLI TWIIARRRAK SEKEVYFANF NSGGFYAGSS SASSFNGLTT
PSNSSFLEKA SMASTSNLLL SKHNSIIQSH FEDSSNSSSS QQGRSYRDAV MGNNNSNANL
SNANKRGSMF ISPVLEVMHS RSASQLELPL YHKSIFQAPN GSVLSLLDPG TPTSTNNNDS
LNYDIYGAEK FNLLQNYTNS DIESNGESVK PQQQPKRSRP PSQYLEDLLN GEL