| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31869 |
|---|
| Symbol | |
|---|
| ID | 4839577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | + |
|---|
| Start bp | 92815 |
|---|
| End bp | 94662 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640390892 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384672 |
|---|
| Protein GI | 150865450 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACT CGGAAGATAG TTCCATTGAC ATAAATGAAT ACTCGATCCG TGATTACTAC
AAATTGCTTC GCCCTCTATG GGCTGCAAAA AATATCAATG CCAGTTATTT AAATAACCAT
AAGTTACTCC GCACTTTAGT CGATTTCTCG TTAACACATT CATTATACCT CAAGAATCTT
CAAAAGAGAG AATTAGAACT TGGTGATATA ATTCCCACAA AAATTAATTA TGTCGACGCT
CTAGTAATCA AGACTCCCAA CAATAACAGT TTAAATAACA CAGAACACGC TTATCAATAC
TATGGATGTT TCAGAAATAA ATTCGTGGAA TTTTGTCCTC ACTTGGCCAT AGCAGTCTAC
TTGTTCAGTA GATTCCATAT TCCAGATGAG TACGGATCAC TTGAATTCAT GGTCTCGGAC
TACAAGAACA AACTCTCCCT AGAAGATGTC AAGCTATTGA AAGGAAACAA TAAGCTATCC
GCCATATCTT ATAGTCAACA ACATAAATCG TCCATCAATG CCCTAAGCCT AAGTGGTTTA
AACTATAAGG ATATCAACCT TAATAAACTT TTAGTCACTC AAACTTTAGA CATTCAAGAA
AAGTTAGTTC TGTTGGACAT TGACCATCTT CCTCATCTGG TCATGTTGAG CTTGGCCGGT
TTCGAATCTT TCACTGACTA CAATATAGCA AGAAATTCAG TAGAACCTCC ACAGGAATTG
CTTGAACAAA TCTTCCCTTT CATCAATAAG CCAAATCCAG AAGAGTCTTT GGCCATGACT
AGAATCAGAC AGTTATTGAT GATGCTTAGA AGGACCTTGT GTCAAGATAT GGTTATAATC
AAGAAGAAAT ATCCATCTAA TCCAGTTTCC AGAAATCCAA TTTTCAGCTC GGAATTATTT
ACCAACTTCT GCAATGAAGT TGAAGCTGCT GGGATAATCG AGGGAACTCC TACATTCTTT
CCACCAGAAG AGGAAGACTA TGATATGAAT GGGGAAGTCG AGGAATATGA TCAAAATAGC
AGCGATAACA AGGTAGACCT TCAAAAAATT ATCGAAATTC AAAATAGTAA AATTAAGAAC
TTGGAAGAGC AACTAGGCAA TTATTACTCT GAACAGAGGG TTATATTTTC CAATCTCAGT
GATTTCATCG AGCGTCAAAA TGAAGTATTT CAGCGCCAGA GTGAATACAT GCAAAAGATC
CAAAATTCTA CAAATGGTCT TCTTGTTCTC TTATCTACGA GGAACAAGAA TATGATCCCT
CTAGTTCAAC AAAGTCTATC AGAAACTAGT GAATTTATTT CGTCCATCAA CAACACAAAT
ATTAAACAAG GATTGAATAA CAGCATTGAA TTACTTGCAA AATTGAATAG CAACACACAC
AGCCAACAGC AACACATAGT TTCCATCACA AACAACACAC AATCGATAAT CAACCAAAGT
ATAGTACAAC CACCCAGCGA GCGGCCAAGC AGCACTCCTT TCCAGCCACC ACCATTAACT
CCAAAACAAA TAGAACGTCA AACAGTTTTG AGGAGGCGTT TGTCCAGACA GGCTACTACC
TTATTTGAAA TGTGGGACGA TTTTAAGGGT TTGGAACAAG AGTTGAAAGA CCATGAAATT
ACCGTGACAG AATGGTTAAA GGTTCATGGA AGTTCTGAAA GACAATTTAG ACACACTCGG
TTAAAGATTA TCAAGTTTAT TGAGGATGAG GCAGCAAGAA GGAATTGCCC AGTTGAATTT
GTCAAGGAAA AACTCCATAC AAAGATGAGA AATAGAGTGA GACCTTGGAC TTTAGACGAA
GTACAGAGAA TGCTTACTTC AGGTAAGAGA ATTGATTTGG ACGACTAG
|
|---|
| Protein sequence | MSDSEDSSID INEYSIRDYY KLLRPLWAAK NINASYLNNH KLLRTLVDFS LTHSLYLKNL
QKRELELGDI IPTKINYVDA LVIKTPNNNS LNNTEHAYQY YGCFRNKFVE FCPHLAIAVY
LFSRFHIPDE YGSLEFMVSD YKNKLSLEDV KLLKGNNKLS AISYSQQHKS SINALSLSGL
NYKDINLNKL LVTQTLDIQE KLVSLDIDHL PHSVMLSLAG FESFTDYNIA RNSVEPPQEL
LEQIFPFINK PNPEESLAMT RIRQLLMMLR RTLCQDMVII KKKYPSNPVS RNPIFSSELF
TNFCNEEYDQ NSSDNKVDLQ KIIEIQNSKI KNLEEQLGNY YSEQRVIFSN LSDFIERQNE
VFQRQSEYMQ KIQNSTNGLL VLLSTRNKNM IPLVQQSLSE TSEFISSINN TNIKQGLNNS
IELLAKLNSN THSQQQHIVS ITNNTQSIIN QSIVQPPSER PSSTPFQPPP LTPKQIERQT
VLRRRLSRQA TTLFEMWDDF KGLEQELKDH EITVTEWLKV HGSSERQFRH TRLKIIKFIE
DEAARRNCPV EFVKEKLHTK MRNRVRPWTL DEVQRMLTSG KRIDLDD
|
|---|
| |