Gene PICST_27631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_27631 
Symbol 
ID4839469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp208717 
End bp209136 
Gene Length420 bp 
Protein Length140 aa 
Translation table12 
GC content55% 
IMG OID640390784 
Productconserved hypothetical protein 
Protein accessionXP_001384698 
Protein GI126136349 
COG category[S] Function unknown 
COG ID[COG3416] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGAAGATCCG CTCCAGCTCC AAGACAACAG TCTAGATCGG CCCATACCGC CGCTGCCCCA 
TCCCACTACC CATCTCGTCC AGCTCCAGCT GCTCATCCAG TGCAACCACA AGCTCAGGCT
TCCCAGGGCC CAGGTTTGTT CGGTCAAATG GCTTCCACAG CTGCTGGTGT CGCTGTCGGT
TCCACCATTG GTCACACTTT AGGTGCCGGA ATCACTTCCA TGTTCGGCGG CTCGTCGTCC
CACGCACCAG TAGAAGCTGC TGCCCCAGTG CAACAGAACC AGTACGAAGA GCAGAAGACT
ACCTGCGATG CCGACGCCAG AAACTTCACC AGATGTTTGG GAGACAACGG TGGCAACATG
CAAATCTGTG AATACTACTT GCAGCAATTG AAGGCTTGTC AAGAAGCCTC TCGTCAATAC
 
Protein sequence
RRSAPAPRQQ SRSAHTAAAP SHYPSRPAPA AHPVQPQAQA SQGPGLFGQM ASTAAGVAVG 
STIGHTLGAG ITSMFGGSSS HAPVEAAAPV QQNQYEEQKT TCDADARNFT RCLGDNGGNM
QICEYYLQQL KACQEASRQY