| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_14247 |
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| Symbol | MIP1 |
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| ID | 4839632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 341936 |
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| End bp | 345118 |
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| Gene Length | 3183 bp |
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| Protein Length | 1061 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390947 |
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| Product | mitochondrial DNA polymerase catalytic subunit |
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| Protein accession | XP_001385083 |
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| Protein GI | 150865746 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GAATACCACG AAGCTCCCCG TGTTAACCAG GTGGGGATCC AGTATCTTTC AGAAGGGCTT
CACAAGAAAA TCTTTCCCTC TGAACCTGTG GATGCATACT TGAAGCCAGA AGAGCCTGAG
CTTTTGAAGA TAGCCAAACT GCATTTGAAA CACAACGATT TGCTCGACAA AAAGACCAAT
GTAGTGGAAC CTATAGATAT CAACAACTTC CCATCATTAG TGGGAAAAAC CTTGGATGAG
CATTTCTACA AGATAGGCAA GCGTAGCGCC GAGCCATATT TAACTATGGC GAATAAGCTT
TTTTCACAAG AACTTCCTCC AAGACCTGAA AACTGGTTAT TCGAACCAGG CTGGTACCGA
TATACTCCTG ATAAGGAGCC TGAACTGGTG CCGTATCCTT TGGAAGATGA GCTTGTGTTT
GATGTAGAGG TACTATACAA GAGGTCCAGT TATTCCGTGC TAGCCACTTG TGTTTCAACG
GAAGCTTGGT ACGGTTGGGT TTCGCCATTC TTAACAAACT ATGCCCAGGA TCCCTCATAC
AGCGACTGGG AACATCTAAT TCCTTTCAAC AGCTTGAAAA AGCCCAAATT GCTCGTTGGA
TTCAACGTTA GCTATGATCG ATCGAGAATC CTAGAAGAGT ACAACATCAG ACAGTCACAA
GCGTTTTTCC TTGACGGAAT GGCTCTCCAC GTTGCTATCA GCGGAATTTG CTCACAACAA
AGACCAAAAT GGCAACAGCA CAGGAAGAGC AAGAACCAGT TAGAATTCCT GGAAGAGTAC
GAAGAAGAAA TTGCGAAGAC AGAATTGGCA GGGTTCGGTG AAGAAATATC CAAGGAATTG
GCCAGTGACC TTGTAGATGA TCCATGGCTA GATCATGGTG CTCCCAACTC GTTGGCTAAT
GTTTTAGATT TTCATTGCAA TGTTAAATTA GACAAATCGC AACGAGACTT CTTTTCCTCT
GAAAATCCCA TGGATGTCAT AAGTAACTTC AACGATTTGA TGAACTACTG TGCTTCCGAT
GTAGATGCAA CTTTTGCAGT CACAAAGAAG CTCTTTCCTG AGTTTCTAGA AAAGGTTCCA
CATCCTGTTT CATTCGCTGC TTTAAGACAC TTGGGAACGT TGATCCTTCC GACTACCACG
AAATGGGACA ACTACATTTC TACAGCAGAA GAAATCTACC AGGATAATAG AGGTCAAGTT
TCAGCAAACT TGAGAACTCG TGCTATTGAA CTCATTCAGT ATATCGAGAA AAATGATCCG
AAGTTGAAAC CAAACTTGGA TGACGATCCC TGGTTAAGAC AGTTGAATTG GACTATCAAA
GAGCCTAGAT TAAAGAAAGA CGGAACACCG ACAGCCAAAC AGGCATTCAT GACAGGCTAT
CCAGAATGGT ACCGTGAACT CTTCAAAACG ACCGATGGCG CCACCAAACA GAGGGAGATG
AACTTGACTG TTCGTACTCG TATTACGCCT TTGCTTTTGC GACTCAAATG GGAAGGTTAT
CCATTGATAT GGACAGATTC TCAGGGCTGG TGTTTCAAGG TACCTTTTGA CGAAGAAATT
TTCACAAAAC TTGAAACTCA GAACTACATT AGAGCCCAAT TAAATCAGAA GGATCTAGAT
TTACTACTCC CAGAACTACG CGATAATGGC AACAGCTTTG AGTTGTTCAA AGTTCCACAC
CCAGATGGAG CTAAGAAGAG ATGTACTCAG ATTATGTCAA AGAGCTATTT GCGTTATTTT
GAAGATGGTA CACTTACTTC TGAGTACAAC TATGCTCAGG AGATTTTATC ATTGAATTCT
GCTGCTTCGT ATTGGATGGG TAACAGAACG AGGATTTCTG AACAGTTCGT TGTTTACAAT
GACAAGAGCG GCGAGAAGAA TAAGTTCTTT GATTCCAAGA AAGAAGCTAA GGATGCTACA
AACATGGGAA TTATCTTGCC TAGACTTTGT ACTATGGGTA CAATTACTAG AAGAGCTACA
GAAAACACAT GGCTCACTGC TTCGAACGCC AAAAAGAACC GTATAGGTTC GGAGTTGAAG
TCGTTGATAG AAGCTCCACC AGGGTACTGT TTCGTAGGCG CCGATGTAGA TTCGGAGGAA
TTATGGATTG CTTCCCTTGT AGGGGATTCC ATGTTTAAGA TCCATGGAGG CACAGCTCTT
GGATGGATGA ATTTGGAAGG CGACAAGCAC GAGAAGACAG ACTTGCATTC AAAAACGGCA
GAAATCCTAG GGATATCTAG AGGTGATGCT AAGGTTTTCA ACTATGGGAG AATATATGGA
GCAGGTGTTA AGTTTGCAAC TCGACTCTTG AAGCAGTTTA ATTCCAAGTT GTCTGAAGCG
GAGGCTGAAG AAACAGCAAA ACTTTTGTAT GCTCGTACTA AGGGAGAAAT GTCTTCATCG
AAATACTTGA AACGGAGACT TTACCATGGT GGAACCGAAT CTGTCATGTT CAATGCCTTG
GAAAGCATCG CCTACCAAAA GAATCCCAGA ACACCGGTAT TAGGAGCTGC TATCACTTCC
GCATTGACTA TTGACAACTT AAACAAGAAC AGCTACTTGA CGTCGAGAAT CAATTGGGCA
ATTCAAAGCT CTGGTGTGGA TTATTTACAT TTACTTGTGG TTTCAATGGA GTATTTGATC
GACAAGTACC AGATCGATGC CAGACTATCC ATTACTGTTC ACGATGAAAT CAGATATCTT
GTCAAAGAAA GTGATAAGTA CAAAGCTGCC TTGTTATTGC AGATCAGTAA TGTCTGGACT
AGAGCCATGT TCTGCGAACA ACTCGGCATC AAGGAAGTTC CACAATCGTG TGCTTTTTTC
TCTGAAGTTG ACATTGATCA TGTGCTCAGA AAAGAGGTGT CTATGGATTG TGTTACCCCT
TCAAATCCCA AAGCTATCCC AGTTGGCGAG TCGCTTGGGA TAAACCAGCT ACTCGAAGTT
TGTGGCAATG GAGACATATT GACCGATGGA AGCACACCTA AGAAACTAAA GCTTTCGAAC
TACAAGTATG AGAAGCGAGT TCCAGTCATG AAGAAGCTCG ACGAAGAATC GAATGCAATT
GCCAATATAG CTAAGATCAG ATTACAGAAC TCTATTGACA AGGAAGAATG GAGAAAGAAC
ATTGGCACAT ACATCAAACT GAAGAAGAAC TCAGACTTTG AAGAAGCACA ACGACAATTC
GAT
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| Protein sequence | EYHEAPRVNQ VGIQYLSEGL HKKIFPSEPV DAYLKPEEPE LLKIAKSHLK HNDLLDKKTN
VVEPIDINNF PSLVGKTLDE HFYKIGKRSA EPYLTMANKL FSQELPPRPE NWLFEPGWYR
YTPDKEPESV PYPLEDELVF DVEVLYKRSS YSVLATCVST EAWYGWVSPF LTNYAQDPSY
SDWEHLIPFN SLKKPKLLVG FNVSYDRSRI LEEYNIRQSQ AFFLDGMALH VAISGICSQQ
RPKWQQHRKS KNQLEFSEEY EEEIAKTELA GFGEEISKEL ASDLVDDPWL DHGAPNSLAN
VLDFHCNVKL DKSQRDFFSS ENPMDVISNF NDLMNYCASD VDATFAVTKK LFPEFLEKVP
HPVSFAALRH LGTLILPTTT KWDNYISTAE EIYQDNRGQV SANLRTRAIE LIQYIEKNDP
KLKPNLDDDP WLRQLNWTIK EPRLKKDGTP TAKQAFMTGY PEWYRELFKT TDGATKQREM
NLTVRTRITP LLLRLKWEGY PLIWTDSQGW CFKVPFDEEI FTKLETQNYI RAQLNQKDLD
LLLPELRDNG NSFELFKVPH PDGAKKRCTQ IMSKSYLRYF EDGTLTSEYN YAQEILSLNS
AASYWMGNRT RISEQFVVYN DKSGEKNKFF DSKKEAKDAT NMGIILPRLC TMGTITRRAT
ENTWLTASNA KKNRIGSELK SLIEAPPGYC FVGADVDSEE LWIASLVGDS MFKIHGGTAL
GWMNLEGDKH EKTDLHSKTA EILGISRGDA KVFNYGRIYG AGVKFATRLL KQFNSKLSEA
EAEETAKLLY ARTKGEMSSS KYLKRRLYHG GTESVMFNAL ESIAYQKNPR TPVLGAAITS
ALTIDNLNKN SYLTSRINWA IQSSGVDYLH LLVVSMEYLI DKYQIDARLS ITVHDEIRYL
VKESDKYKAA LLLQISNVWT RAMFCEQLGI KEVPQSCAFF SEVDIDHVLR KEVSMDCVTP
SNPKAIPVGE SLGINQLLEV CGNGDILTDG STPKKLKLSN YKYEKRVPVM KKLDEESNAI
ANIAKIRLQN SIDKEEWRKN IGTYIKSKKN SDFEEAQRQF D
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