Gene PICST_89371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_89371 
Symbol 
ID4838871 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp455406 
End bp456373 
Gene Length968 bp 
Protein Length137 aa 
Translation table12 
GC content39% 
IMG OID640390186 
Productpredicted protein 
Protein accessionXP_001384383 
Protein GI126135718 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0093] Ribosomal protein L14 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TGTTTATAAC ATATCAATAA TTATACATAA TGTCTGGTTC TGGTGCTTCC GGTAACAAGT 
TCCGTATGTC TGTATGTGCC GTTTATTAAG AGTCCACGAT GGTAGTAGAG AAAGATATAA
TAATCCAGAA TAATATCAGA TGTCTGCTTC AGAGCAGAGA AATATCAGAT CACCGAAAAG
CAGCGAAGAA AAAGAGAGAA ACTGTCAATG TCCACAGTGT AATGAGACGA CTAGATATTC
GTGTTGTATG CCATCATAAT GTTCACTTCT ACAGTGATAT GATGATCCAA AAAGTGAAAC
CCTAGAAAGA TTGAAGTGAA AAATTAGAAA GTAGTAAATG CTCAAGAATT CGGAAAATCG
TCACCAATAT TCATACCGAT ATATTCATTT ACTTAAAACG CTAAAGGAAT GACATCGTGA
CAAGTTTTAT TATAATTCCA TCATATCAGC AACATCAAAT CTAAAATCCA GATTATCTAA
AATTTATCCT TCATCTACTA CATCTCATCC CATCTGAATA TGTACTAACA ATATTTTATA
GTTGGCTTTG CCAGTCGGTG CTGTCATGAA CTGTGCTGAT AACTCCGGTG CTAGAAACTT
ATATGTCTTG GCCGTCAAGG GTGTCGGTGC TAGATTGAAC AGATTGCCAG CTGCTTCTGC
TGGTGACATG GTCATGGCTA CTGTCAAGAA GGGTAAGCCT GAATTGAGAA AGAAGGTCAT
GCCAGCTATC GTCATCAGAC AATCCAGACC ATGGAGAAGA AAGGACGGTG TCTACTTGTA
CTTCGAAGAC AACGCCGGTG TCATTGTCAA CCCTAAGGGT GAAATGAAGG GTTCTGCCAT
CACTGGTCCA GTTGCTAAGG AATGTGCTGA CTTGTGGCCA CGTATTGCCT CCAACTCCGG
TGTCGTTGTT TAAGCGAATT GGGTGTTTCA TATTCTACAT AATATAATAA TAACATATTA
CGTTTATC
 
Protein sequence
MSGSGASGNK FRMSLALPVG AVMNCADNSG ARNLYVLAVK GVGARLNRLP AASAGDMVMA 
TVKKGKPELR KKVMPAIVIR QSRPWRRKDG VYLYFEDNAG VIVNPKGEMK GSAITGPVAK
ECADLWPRIA SNSGVVV