Gene PICST_89290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_89290 
SymbolALG2 
ID4838957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp538406 
End bp539889 
Gene Length1484 bp 
Protein Length458 aa 
Translation table12 
GC content42% 
IMG OID640390272 
Productmannosyltransferase 
Protein accessionXP_001384063 
Protein GI150865017 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGACTTTACA TTCTTGCTGT TCATCTCTAA CGCGTCACCA TGGCCAAGAA GATCGCCTTT 
GTGCATCCGG ATCTTGGAAT TGGAGGAGCC GAGCGATTGG TAGTGGATGC TGCTGTAGGA
CTCCAGAACA TCGAAGACAA TGAAGTGATA GTATTCACAT CTCATTGCGA CAGGAGCCAC
TGCTTTGAGG AGGTCAGCAA CGGCACTTTG GCTGTCAAAG TGTTTGGTGA CTTTCTTCCA
ACCCATTTGT TCAAGAAGTT CCATATTTTG TGTGCCATAC TCAGACAGTT GTACCTCACT
TGTCGATTGA TAGCCACTGG AGAAATCAGC CAGTACGACT ATTTCATTGT GGACCAATTG
TCGTTCTGTA TTCCTATCTT GAAACTTTTC AGTCCGGACT CAACAAAAGT GTTGTTTTAC
TGCCATTTTC CAGACCAATT GTTGGCGAAA AAGGGTGGAT TTCTTAAGAA GTTGTACAGA
TTACCGTTTG ATGCCATAGA AGAATGGACC ACAGGCTACA GCGATAGAAT TGTAGTAAAT
TCCAACTTTA CCAAGGGAAT ATTCCACCAA ACATTCACCC ATTTGAACGC AATGGATCCA
GGGGTAATAT ACCCATGTGT AGATACCAAT GTGAAGCCAG ACGATGTAGC TGATGTGGAA
GTGACAAGCT TCTTCAAAGG CAATAGATAT TTCTTGTCAA TCAACCGTTT TGAACGGAAG
AAGAATATCG AATTGGCCAT AAAGGCATTT GCCAAGTCGA AGAAGTTGAT CCACGGCAAA
AGCAAACCTC GCTTGGTAAT TGCTGGAGGG TATGATGTGA GAGTTCTTGA GAATGTAGAG
TACCTCAATG AGCTCAGCAA GCTTTGTGAT TCTTTGAAAT TGACCAGTTT CACTATCAGA
GGCAAATTGA TTGTCATGCC TCCTGCCACT GACATTTTAT TCTTGCCGTC GATCAGATCG
TCGTTGAAGA CAGCCTTGAT CAAGAATGCC GAGTTGTTGC TCTACACTCC AGCTTTCGAA
CATTTCGGTA TAGTACCTGT AGAGAGTATG TTGCTAAAAA CACCCGTGTT GGCTGTAAAC
AACGGAGGTC CTTTAGAGTC TGTAGTCAAT TTTGACTTTA CCAACACTGA GGAAGCTACA
GGTTTCACAG AAGAGCCAAA TCATGAAAAA TGGGCCAAAA TCATGATTAA GTATTACAAC
GATTTGTCAC CTGAAACTAA GGCTGTCATT GGTGAAAATG GCTACGAGAG AGTATTAGCC
AAATTTTCAA GAGACCAGAC CAGTCAGGCA TTCATGGACA ATTTGAGGGC CTGTGACTCT
GCTCCTAGAC TGGGACTCTT ATACATAGTT GTCAGATTTT GGCAGATTGT GCTTCTAGTG
ATAATTGCAG CACTTGCCGT GTTATACTAT TCATAAGCTA GCTACTACAT TTGGTTATCA
TTATAAATAT TATTATTAGT AGTAGAATGT ATGAATCTAT TTAC
 
Protein sequence
MAKKIAFVHP DLGIGGAERL VVDAAVGLQN IEDNEVIVFT SHCDRSHCFE EVSNGTLAVK 
VFGDFLPTHL FKKFHILCAI LRQLYLTCRL IATGEISQYD YFIVDQLSFC IPILKLFSPD
STKVLFYCHF PDQLLAKKGG FLKKLYRLPF DAIEEWTTGY SDRIVVNSNF TKGIFHQTFT
HLNAMDPGVI YPCVDTNVKP DDVADVEVTS FFKGNRYFLS INRFERKKNI ELAIKAFAKS
KKLIHGKSKP RLVIAGGYDV RVLENVEYLN ELSKLCDSLK LTSFTIRGKL IVMPPATDIL
FLPSIRSSLK TALIKNAELL LYTPAFEHFG IVPVESMLLK TPVLAVNNGG PLESVVNFDF
TNTEEATGFT EEPNHEKWAK IMIKYYNDLS PETKAVIGEN GYERVLAKFS RDQTSQAFMD
NLRACDSAPR SGLLYIVVRF WQIVLLVIIA ALAVLYYS