| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89256 |
|---|
| Symbol | |
|---|
| ID | 4838730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009044 |
|---|
| Strand | + |
|---|
| Start bp | 1241500 |
|---|
| End bp | 1242849 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640390045 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384193 |
|---|
| Protein GI | 150865110 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AACAAACACA TATTTACCTT TATTATTATC CCTTCCCCTA GTTTTTTGAT TCCAAAGAAT
TTCAAAATGT GTGCTTAAAC CTATTTCCCC TAGCGTTTGT TATATACCCC CTGAAAATTA
TTTTATTACA TTAGTTAATT AAAATAAATT ACATTAGTTT TATCAATCTT AGATATAAAA
CCAATCGAGT TGTTTCCATC CAATCTGTCC ACCATGTATT CGTGATACCA GTTTTTACCG
TCCAATATGA CGTCTCCGTT TATACGAGCT TATCTACTGC CCTAGTCTAA AAATTTGAAT
TTTTACAAGT CCAGTTTACA TCCAGTTACA CCAGAATATC CCACTACGTT TCAGTTTTTA
AAATTGTCCC CTGCTACATA TACACAAGTT ACATTAACAA TGTCCGCTTC TACTACTATT
CCTATGATCA TGTCTGCTGA TTCCATGTTT GAATCTGCAG ATATGTTTAT TCCCCACAAC
GAGCAAGTCG CCAACCCCTT CGAAGAAGAG GTTGCCGCAA TCAGTCGCAA GAATGCTGAA
CTCGACTTGA GTTCGGCCTT GCCAAATGAG AGACAGTCAG AGACGTCTCC ATTTAACATC
CATTCAGCCG TGTTGGACTC CGTGTTCTCC AACGTGTTGG ATGAGCATGA CAACATCCAA
GACCATACTC CTATGTTTGA CGAACTCGAC TTCATAGTCG ATGGAGCCAA GGTCAACCTG
AAGGATGACT GGGTGTCCTT GTTTGGCCCT GCTGCCGACT CGGATGCACA GATAATCTCT
TTAGATGCAG ACATTGAAGA CAGCTTGGTC AAGAAGGAAG ATTTGGACGA TGCCCTTTTG
GACTTGTCTG TTCCTTCGGT TGCACCAGTA ACCGAGGCTA GCAGTCCTGC TCCTAGCTTT
TCCACAATCG CTACAAGCAC TACTGCTGCT ACCAAGAGGT TGTACAGTGA AGTTGAAGAT
ACTTTCGAGT TCTCATACAA GAAGCCCGAA CAGTCGCAGC TAATCACTCC CAACCCCTCT
TCAAACTTGC CTACTCCACT TTTGGATTCC CATAGTAAGA GTAGAACAAG TGCTCCTTCA
AAGAAGGTCG ACCATTTGGG TTGTGTCACT TACTCCAAAA AGCAAAGAAC ACAGCCTTTG
GTTCCTATTG ATATCGACGA TAGTGCCGAC CCTATCACTC TCAAGCGTGC TAAGAACACT
GAGGCTGCTA GAAGGTCTCG TGCTAGAAAG ATGGAAAGAA TGAACCAATT GGAGACCAAG
GTAGAAGAGT TAATCCATGA AAAGTCCACC TTGGAATTGG AGGTACTCAG ATTGAAGGAG
ATGTTGTTGG CCAACGGCAT TAAGCCATAG
|
|---|
| Protein sequence | MSASTTIPMI MSADSMFESA DMFIPHNEQV ANPFEEEVAA ISRKNAELDL SSALPNERQS
ETSPFNIHSA VLDSVFSNVL DEHDNIQDHT PMFDELDFIV DGAKVNSKDD WVSLFGPAAD
SDAQIISLDA DIEDSLVKKE DLDDALLDLS VPSVAPPEQS QLITPNPSSN LPTPLLDSHS
KSRTSAPSKK VDHLGCVTYS KKQRTQPLVP IDIDDSADPI TLKRAKNTEA ARRSRARKME
RMNQLETKVE ELIHEKSTLE LEVLRLKEML LANGIKP
|
|---|
| |