| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89189 |
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| Symbol | LEU6 |
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| ID | 4838606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1255293 |
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| End bp | 1257228 |
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| Gene Length | 1936 bp |
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| Protein Length | 575 aa |
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| Translation table | 12 |
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| GC content | 47% |
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| IMG OID | 640389921 |
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| Product | Alpha-isopropylmalate synthase/homocitrate synthase (LEU4) |
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| Protein accession | XP_001384536 |
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| Protein GI | 150865355 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0336795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CATTCTTACT TTTGCATAAA AAACATATAT AAATAGCATT AGTGCCAGTT TTTGACCGAG
ACTGACTTGA ATAATATCAT CCTCTTCATC TCGATCACAT CTTCACCGCC CATCATGCCT
ATGTTAGCTG ATCCATCCCA AAAGTACAAG CCTTTCCCTC CTGTACATTT ACCCAATCGT
CAATGGCCAT CTCGTACGCT TGAAAAACCA CCTAGATGGC TTTCCACCGA CTTGAGAGAT
GGAAACCAGT CCTTACCAGA TCCCATGTCA ATTGCTGAAA AGAAGGAGTA CTTCAAGAAG
TTGGTAGATA TTGGTTTCAA GGAAATCGAA GTGGCCTTTC CTTCGGCATC GCAGATCGAC
TTTGACTTCA CCAGATTCGC TGTGGAAACA GCTCCAGCAG ACGTTGCTGT CCAGGTCTTG
TCTCCCTGTA GAGAGGACTT GATCAAGCGT ACTGTAGAGT CGTTGACCGG AGCCAAAAAG
GCTATTGTGC ACATATACTT GGCTACGTCG GACTGCTTCC GTAACGTAGT CTTTGGATTA
ACCAAGGAAG AGTCGAAGGC TCTTGCCGTA AAATGCGCCA AGTTGGTCAG ATCTTTGACT
AAAGATGACC CCAAGCAACA AGCAACTGAG TGGGACTTTG AGTTCTCGCC AGAAACCTTT
TCAGACACCG ATATGGACTA CGCTGTAGAG GTCTGCGAAG CCGTCAAGGA GGCCTGGGGC
CCTACTGAAG ACAGACCTAT CATCTTCAAC TTGCCAGCTA CCGTGGAAAT GGCTACTCCA
AACATATATG CCGACCAGAT CGAGTACTTT GCTACTCACA TCTCGGAAAG AGAAAAGATC
GCAATTTCGT TACATCCCCA CAACGACAGA GGATGTTCTG TTGCTGCCGC TGAGCTCGGC
CAGTTAGCTG GTGCTGACAG AGTTGAGGGA TGCTTATTTG GAAATGGAGA AAGAACAGGT
AACGTTGACT TGGTCACCTT GGCTCTCAAC TTGTATACTC AGGGTGTTTC ACCTAAGCTT
GACTTCTCCG ATATCAACTC TGTTATCGAC GTAGTAGAAA AGTGTAACAA GATTCCTGTT
CATGCAAGAG CTCCTTATGG AGGTGCCCTT GTCGTTTGTG CCTTCAGTGG ATCGCACCAA
GACGCCATCA AGAAAGGTTT CAATGTGCAC GAGAAGAAGG TCGAAGCTGC TGCAGGAAAA
CATGTCCACT GGCAGTTACC CTACTTGCCA TTGGACCCTC AGGATATTGG CAGAACTTAC
GAGGCCATCA TCAGAGTCAA CTCGCAGTCT GGTAAGGGTG GTTCCGCTTG GGTCATCTTG
AGAAACTTGG AGCTCGACTT GCCCAGAGGA TTGCAAGTGG CTTTCTCCAA GGTGGTTCAA
CAGCGTGCTG AAGTCAAGGG TCAGGAGTTG ACCAACGAAG AATTGTGTGA CTTGTTCAAG
CAAGAATACT ACATTGACTA CGAGGGTGAC AACTTCAACG ACCAGACCTA CAAGTTGATC
GACTACTCCA TCCTGACTCC TGCCAAGGGC CAGAAGGAAA TTGAAGCCGA AATCCAGATC
GATGACAAGA TCGTCAAGAT CAAGGGCCAG GGTAACGGTC AGCTTTCGGC TTTCAATGCT
GCCCTCTCCA AACACCTCAA CATCGACTTA AACGTCAAGC ACTACCACGA ACACTCATTG
GGTGTAGACT CGAATTCTCG TGCAGCCACC TACATCGAAG TCTCACTCAA AAACGACAAC
GTCACCAGAT GGGGTGTGGG TATCCATGAA GATGTCTCGC AAGCTTCTTT CTTATCTCTC
ATCTCCATCT TGAACGGCTT GCACAGAAAC AAGGATATTT AGATATCTTA GTTTCCCTGA
CGATACTATT TATTCAAGTC TTATTGTTAC GACACCTCTT TAGTTCACCC AAAAAAAATT
ATGATGATTA CTTGAC
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| Protein sequence | MPMLADPSQK YKPFPPVHLP NRQWPSRTLE KPPRWLSTDL RDGNQSLPDP MSIAEKKEYF
KKLVDIGFKE IEVAFPSASQ IDFDFTRFAV ETAPADVAVQ VLSPCREDLI KRTVESLTGA
KKAIVHIYLA TSDCFRNVVF GLTKEESKAL AVKCAKLVRS LTKDDPKQQA TEWDFEFSPE
TFSDTDMDYA VEVCEAVKEA WGPTEDRPII FNLPATVEMA TPNIYADQIE YFATHISERE
KIAISLHPHN DRGCSVAAAE LGQLAGADRV EGCLFGNGER TGNVDLVTLA LNLYTQGVSP
KLDFSDINSV IDVVEKCNKI PVHARAPYGG ALVVCAFSGS HQDAIKKGFN VHEKKVEAAA
GKHVHWQLPY LPLDPQDIGR TYEAIIRVNS QSGKGGSAWV ILRNLELDLP RGLQVAFSKV
VQQRAEVKGQ ELTNEELCDL FKQEYYIDYE GDNFNDQTYK LIDYSISTPA KGQKEIEAEI
QIDDKIVKIK GQGNGQLSAF NAALSKHLNI DLNVKHYHEH SLGVDSNSRA ATYIEVSLKN
DNVTRWGVGI HEDVSQASFL SLISILNGLH RNKDI
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