| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89074 |
|---|
| Symbol | |
|---|
| ID | 4838503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009044 |
|---|
| Strand | + |
|---|
| Start bp | 1640710 |
|---|
| End bp | 1642521 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640389818 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384268 |
|---|
| Protein GI | 150865164 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TCACCTTCTA CCAGTCAGCA GCTGTCGCCG ACACCGCCTC GCTATCCACC TGTGCCCGCA
TCGGCCCACT GCATTGTCTT AAGACGCCAA TCTCATCTCA TTGAATCCCT CGTACTCATT
TGTACAGTAG CACTGAACAT CACGTACATT CACTGAGATC ATACAACATT ACAAACACTG
AATGGCCAAA GAACATTCAA CACCAATAAC AAACATCAGC AACTCATTCA ACACAATTAG
TCATCAGTAG TCAAAGAATA TTTAATTTTC CACGGCTTTA GAGCTTCCAT TTCATACAAC
AATCATACTA CTTCACATTA TTCCAGAGAC TCTACTCCGG TCTCATTCTC ATTAATAGCC
ACTTCACTTC TTCCTTCTAT TACTACTCAC AATGGGCTGT GGTGCTTCGA AAGAACCTAT
TCCAGAAGCC TCAGCTGGAA ACACCAACGC CAGGCGCAAT TCCCAGAGAC AGGCTCTAGC
AAACGGTACT AAACAAACGT CTAATGCCAA CAACAATACC AACAATAACA GTTCGTCCAC
AGAATCTTCA AATGTCGTAG AGAAACGTGC CAATGGCTCG GCTTCAACGG CTGCTTCAAC
TGCCATTAAT CCCGTAGACG CGGCTACGCA ATCCGATCCC AATAAGGAAG TGAAGATCTT
ATTGCTCGGC TCAGGTGAGA GTGGAAAATC TACCATCGTC AAGCAGATGA AGATTTTGCA
CCAGAATGGC TATACCAAAG AAGAACTGTA TGAATTCAAG CCTTTTGTTT ACAAGAATAT
CTTGGACTGT ATCAAGAACG TCATCAACGC CATCATCGAC TTGCAACCAG ATTTGATCAA
CAAAAGTGGC CATTTAGAAA GCGCAAATGG CACAATCGAA GAGGATAAAG ACAGCTTAGA
AGAATTTAAA GGTCAAGACT TGGAAAAAGA TAAGGACAGA AAACATATTC TAGATTACGA
TGATTTGAAT GAAGTGTTGG ACTACGAGTT CTCCATCGAT TCAGAGCAAG TTTTCAACCC
GGTCATTGCG CAAAAGATTA AAACCATATA TAACACTCCA GAAGTCAAGA ATTTCATGAA
ATTCCAACAA GCCAACTTCT ACCTCATCGA TTCTACCCAC TACTTCTTGT CAGATGTCGA
CAGAATCACA TCACCAGATT ACGTGCCCTC AGTAAGTGAC ATCTTGAGAA CTCGTAAAAA
GACTTCTGGT ATCTTTGATT TTACGTTCCA GATGAGTGGA GGCTTAAATA TCCACATGTA
CGATGTAGGT GGACAGAGAT CTGAAAGAAA AAAGTGGATC CATTGCTTCG ACAATGTTAC
CTTGATCATT TTCTGTGTAG CATTATCGGA ATACGATCAA GTACTACTTG AAGAAAATTC
TCAGAACCGC TTAGAAGAAT CTTTAGCGTT GTTTGATTCA GTCGTTAATT CTAGATGGTT
CTCCAGAACT TCCATCGTAT TGTTCTTGAA CAAAATCGAT GTCTTTGCCG AAAAATTGGC
ATACTCTCCT TTAGAGAAAC AATTCCCGGA CTACACCGGA GGTAACAATA TCAACAAAGC
TGCCAAGTAC ATTTTGTGGA GATTTACCCA GGTGAATAGA TCCGGTTTAA ACATTTACCC
CCACGTTACA CAAGCTACAG ACACTTCAAA CATCCAGTTA GTTATGGCTG CTGTCAAGGA
AACGCTCTTG GAGAACTCCT TGAGAGATAC TGGTATCTTG AACAATTGAA GCTCCTATTT
ATTAAACTGT CATATTTCCA TGACATTACT TTTAATATTT GTATGTATTC TTGGATAAAA
GTGATTCATG AT
|
|---|
| Protein sequence | MGCGASKEPI PEASAGNTNA RRNSQRQALA NGTKQTSNAN NNTNNNSSST ESSNVVEKRA
NGSASTAAST AINPVDAATQ SDPNKEVKIL LLGSGESGKS TIVKQMKILH QNGYTKEESY
EFKPFVYKNI LDCIKNVINA IIDLQPDLIN KSGHLESANG TIEEDKDSLE EFKGQDLEKD
KDRKHILDYD DLNEVLDYEF SIDSEQVFNP VIAQKIKTIY NTPEVKNFMK FQQANFYLID
STHYFLSDVD RITSPDYVPS VSDILRTRKK TSGIFDFTFQ MSGGLNIHMY DVGGQRSERK
KWIHCFDNVT LIIFCVALSE YDQVLLEENS QNRLEESLAL FDSVVNSRWF SRTSIVLFLN
KIDVFAEKLA YSPLEKQFPD YTGGNNINKA AKYILWRFTQ VNRSGLNIYP HVTQATDTSN
IQLVMAAVKE TLLENSLRDT GILNN
|
|---|
| |