| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_88879 |
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| Symbol | APL6 |
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| ID | 4838978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 847657 |
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| End bp | 850247 |
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| Gene Length | 2591 bp |
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| Protein Length | 817 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390293 |
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| Product | clathrin assembly complex beta adaptin component |
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| Protein accession | XP_001384464 |
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| Protein GI | 150865307 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5096] Vesicle coat complex, various subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.789212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACT CATTCGCAAA GTTCTCGTCA ATGCTAGAGT CCGCTAAGGA TCTCACCATC
GAAGCCGCGG TGTCGGCTCT GTCCCGGCTT ACCGATACGC CTTCTGGTCT GAGACAGGTG
GAAATTCCAA AGTTGTTGAA CTCACGTCTG GACCGCGATA TCTTGACGGG AATGAAATGC
GTGATAGCAG CAACAGCTAG AGGTGAAGAT GGGTTACCCT ACTTTGCTGA TGTGGTGAAA
AACGTGACAA CATCCAACGA AAGCATTCGA AACTTGGTAC TTATCTATTT GACAAGATAT
GCTGAAGTAG AGCCAGACAC AGCATTATTG CTGATAAATT CGATCCAAAA GTCATTGAAC
GAAAAAAATG CCATATCTCG TGCCAAGGCG ATCAGAGCGT TAGCAGGGAT CAGAATCTCG
TCCATTTTGC CAATTGTATT ACTTTGTATC AAACGTACCC TAACGGACCC TTCACCACTT
GTCAGAAGTG CCACAGCCAT TGCTATCGGC AAGGCCTTTG ACATCGATGA TTTGGAAAGC
AGTTCTAAGA AGCAGATGGT GGAATATCTC ACCAAGTTGT TGAGCGATAG CGACTCTTCA
GTAGTTTCTA CAGCCATCAA GACGTTCTAT AAGCTCTTGC CTCAGTTCTC TACCTCTTCT
AAAATCTGGG ATCCAATCCA TGGCAACTTC CGTCGTTTCT GCTCCATAAT CAATGAATTT
GACGAATGGA GTCAGGGCTT TTTGATCGAT ATTCTAACAG AGTACTCGCG CCGTTTTCTT
CCCAGACCAA AGCTTTATCT GGTTGATGAA TCCAATCAAG TCATAGATTT ACCAGAGGAT
TACAGTCAGA TTCCGTTCTC TGCTTACGAA GTATCGTTTG ACGAAGATTT GAATTTATTT
CTCAACTCGT TGAAGGTGCT CCTCTACTCA AGACTGGAAA GCGTAATCCT TGCAGTGGCT
AGAGCAGTGT ACTTTTTGGC GCCGCCTCTG ACTTTCAAAG ACTTCCAGTT GAGCCAACCG
CTTGTACGAA TTGCATCTAC TTCTCGTGAT AGCCAAATCT CCCTCTTTGC TCTACAGATA
ATCTCGAGTA TCAGCTGGAA GGACCAGTCT ATTTTCGTAA ACAATGTAAA GAACTTCTAC
GTTTATCCTT CCGACCTGTT TGAGGTAGCC AGCAGCAAGC TAGATATTCT CGCATCATTG
GCACAAGAAA AAAATATCAA GTACATCTTG GAAGAGTTGA AGTATTACAC TTTATCGTCG
AGAAATAGCG ACATCGCCCG GGAAGCCATA ATATCTATAG GCAGATGTTC ACAGCTTTCC
CCAGAATGGA ACAGGAAAAT TCTTAGATGG TGCTTGAAAC AAATACAAAA GACAACAGGT
TCCATTTTGA ACGAGTTGCT TACCGTGGTG AGATACTTAA TTCAGCAAAA AAACAGCTTC
ACCCTTAACG TAGCAAACGA GAGAGACGAG ATCATCAATA CGACATACCA GTTGTCGTTG
ATTCTACGCG ACAGCAGCTT GAACTTAGAA AGTGATGCCA AAGCAAGCAT AGTCTGGATT
ATAGGTGAAT TCACAGGGGT GGCAGAAAAT GCCATTGGAC CAGATGTATT AAGACATCTA
ATCAAAGGCT TTTCCAAGGA AGAAGAAACT ACAAGATACC AGATATTAAT GCTTGCGGCT
AAAGTCGCTT CTTACGAAGT CAAAAGAATT AAAACTGAAG CTGGAGATGA CGAAGACATA
TACAATCAAC GCCTTGGAAA TAGCATTAAC TATAAAATGT TTCAGCACGC TTTACATTTA
GCCAAATATG ACAATTCCTA CGACACAAGG GACAGAGCAC GAATGTTGAA TATCTTATTA
AATTCAAGCA GCTCGATGTC GGAATTGGCC ACATTATTTT TGCAAGTACC AAAGCCAGTA
CCTGTAGTCG GTTCTAAGAA GGATGCTTCT CTTGTTCAAG CCAGGGCATT GGAAGAATAT
CTCGCCATAA GAGATTGGTC TGAAGCTGAT ACCCTTCCTA AGGCAGATAT CAGAAAAGAG
GCAAAAGTGA TTTTCAATAG TCTCGGTGGC GCCGGAATAT CGTCCTTCTC AAGTGTAGAA
AAGTCGCCCA CGCCTCCTCA GATGCCGACC AGTCGTTCAA TCTCTTCAGA ATCTTATCTT
AATTCTCGTG TCCCAGAGAA GAAGCAAACT TATCACTTGC AAAGTTTAGA CGATTTCTTT
GGTAATGACG AATCAGAAGA AAGTTCCAGC GAGGATGAGG AGGACGACGA AGAGGAAGAG
GAAGACGAGG ACGAGGACGA GGATGAGAAC GAGGACAACG AAGAAGACGA CGATGAAGAC
GACGAAGAGG ACGATGAAGA AGTCTCATCT TCGGACGAAG AACAGGATTC ACATGAACTG
GACAATTATG CCTCCGACTC AGACACTAAG CGAGCATTAC TTTCTAAGGA ATAAGTACGA
AAGTAAGGAA CGAGAGTTTA CCGATATTTT CTACTCTAGG TTAGAAATAT AAGGTAATAA
TAATATACAA TGGGGCTTAT CCCTCGTCAA TGTGAATTAT CACACACAGA GGAAAGAACC
GAATAATACC T
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| Protein sequence | MTDSFAKFSS MLESAKDLTI EAAVSASSRL TDTPSGSRQV EIPKLLNSRS DRDILTGMKC
VIAATARGED GLPYFADVVK NVTTSNESIR NLVLIYLTRY AEVEPDTALL SINSIQKSLN
EKNAISRAKA IRALAGIRIS SILPIVLLCI KRTLTDPSPL VRSATAIAIG KAFDIDDLES
SSKKQMVEYL TKLLSDSDSS VVSTAIKTFY KLLPQFSTSS KIWDPIHGNF RRFCSIINEF
DEWSQGFLID ILTEYSRRFL PRPKLYSVDE SNQVIDLPED YSQIPFSAYE VSFDEDLNLF
LNSLKVLLYS RSESVILAVA RAVYFLAPPS TFKDFQLSQP LVRIASTSRD SQISLFALQI
ISSISWKDQS IFVNNVKNFY VYPSDSFEVA SSKLDILASL AQEKNIKYIL EELKYYTLSS
RNSDIAREAI ISIGRCSQLS PEWNRKILRW CLKQIQKTTG SILNELLTVV RYLIQQKNSF
TLNVANERDE IINTTYQLSL ILRDSSLNLE SDAKASIVWI IGEFTGVAEN AIGPDVLRHL
IKGFSKEEET TRYQILMLAA KVASYEVKRI KTEAGDDEDI YNQRLGNSIN YKMFQHALHL
AKYDNSYDTR DRARMLNILL NSSSSMSELA TLFLQVPKPV PVVGSKKDAS LVQARALEEY
LAIRDWSEAD TLPKADIRKE AKVIFNSLGG AGISSFSSVE KSPTPPQMPT SRSISSESYL
NSRVPEKKQT YHLQSLDDFF GNDESEESSS EDEEDDEEEE EDEDEDEDEN EDNEEDDDED
DEEDDEEVSS SDEEQDSHES DNYASDSDTK RALLSKE
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