Gene PICST_88817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_88817 
SymbolBDE99 
ID4838996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp120878 
End bp122231 
Gene Length1354 bp 
Protein Length418 aa 
Translation table12 
GC content45% 
IMG OID640390311 
Product1,4-butanediol diacrylate esterase 
Protein accessionXP_001383983 
Protein GI150864956 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.642668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CACATTTCCG TCGTTCATTA ATTGAAGTTA TACACCTATT TAATTCACTT TTGATATTCA 
ACTTCCACTG CATTGGATTT GATTTTATTC CTTTAAGATG GTGTTATCAC AACAACAGAA
GCTCAGGCTC GCCTCAAACA TAGATGCTAC TCTCCAGAAA TATACTGTAT CTGACGATGC
TGAATCTCAG CCTAGGGTCA ATGGTTTGGT GCAGGGAGTT AGTGATGACA AGGGCACAGT
GTATTTGAAA GGTTCGGGCT ACAAAGACAT TGGCACTGGT GCCAAGCTCG ATGTGGATGA
CATCTTTGGC GTCTATTCTT GTACCAAGAC TATCACAGCT ATGGGGGCTT TGAGGTTGGT
GGATGAAGGT AGACTCGACT TGGATGCTCC TGTGACCAAA TACTTACCGG AAGTAGCTGA
AATTGGGGTC ATTGATTATG ATGCTGTTAA TGAAGAGACT GGTGCCTACG AGAAGTTTCC
AACAGCTCCA AATTCGCCAG TCACTGTGAG ACAATTGCTC TTACATACGT CTGGATTTGC
TTACCCATTC ACCCATTACG ACGTTCTCGT ATTGGCTACT AAGAACAAGC CCAAGGAGTT
CAACCCCAAC GATCCTACTA GAGCGTATTT TACGAATGAG AAGACACCCT TGGTTCATGA
GCCTGGGTCC AGGTGGATCT ACGGCTACAG TTTCGACTTT CTTGGGTTTG TCATTGAAGC
TGTATCTGGC AAGAAGTTGG GTGAATACTT AAAAGAGGCC ATCTTTGACC CAGCAGGAAT
GACGAGCACA ACTTTCCATC TCACGGGCGA CAAGTCCAAC GTAGTCAAGT TGCATCTCAG
AAGAAGCACT GGAAAACTCA CTTCTCTGCC TAAGGGTATC GCTCATGACC CTATTCTAGA
TTTGGGTGGA CAAGGTGTTT TCACCAATGT GAGCGACTAC TTGAAATTCT TGAGGGTGTG
GTTGAACTAT GGAATTTCAC CCGATACTGG AAAACGGATT TTGAAGGAAG AAACGGTCTT
GAATGCAATC AAAGACCATT TGCCAGCAGA AATTGAGATG GATGCATTTC CAGGCTTGAG
TACGTTCGAT TTAGAAGGCG AGGACTTGGC TCGTGAAGGT TTTACATTGA CGGGAAATGC
TCGTGTCAGC AACAGATTGC CCACAGGCAG ACCCGTGGGT TCTATATACT GGAGTGGGTT
TGCCAACTTG TACTACTGGA TAGACTTTGA AAATAAGATA GCCGGATTCC AAGCTGGGCA
GATAATGCCA TCTAGAGACC CAGAATCTGT TGCGGCGTTC AATGAGTTTG AGACGGCGGT
GTATAAGTCG TTAAAGGGTG ATAGTAAGTT GTAG
 
Protein sequence
MVLSQQQKLR LASNIDATLQ KYTVSDDAES QPRVNGLVQG VSDDKGTVYL KGSGYKDIGT 
GAKLDVDDIF GVYSCTKTIT AMGALRLVDE GRLDLDAPVT KYLPEVAEIG VIDYDAVNEE
TGAYEKFPTA PNSPVTVRQL LLHTSGFAYP FTHYDVLVLA TKNKPKEFNP NDPTRAYFTN
EKTPLVHEPG SRWIYGYSFD FLGFVIEAVS GKKLGEYLKE AIFDPAGMTS TTFHLTGDKS
NVVKLHLRRS TGKLTSSPKG IAHDPILDLG GQGVFTNVSD YLKFLRVWLN YGISPDTGKR
ILKEETVLNA IKDHLPAEIE MDAFPGLSTF DLEGEDLARE GFTLTGNARV SNRLPTGRPV
GSIYWSGFAN LYYWIDFENK IAGFQAGQIM PSRDPESVAA FNEFETAVYK SLKGDSKL