Gene PICST_83602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_83602 
Symbol 
ID4838825 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp418036 
End bp419267 
Gene Length1232 bp 
Protein Length107 aa 
Translation table12 
GC content35% 
IMG OID640390140 
Productpredicted protein 
Protein accessionXP_001384038 
Protein GI126135028 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2451] Ribosomal protein L35AE/L33A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TAAGCTTCTA CACCAATAAT AGATTATAAA TCATACAAGA TGGCTGAATC TCACAGATGT 
ATGTAACAGA AGAGAGTGAA ACAACAAGAG CAAGCCCAGT TGCTTCTGAG TCCAGTAAAG
TCAAATTCTT CAGTGAAAAA TATGATATCG AGTATCCAAA AATTCTTCAT TCAAGACAAG
AGTAGTGAAG AATATCAGGT AAAAGAATGT ACAACAACCT CAGTAAAACC GTCAAAGGTA
TAAACAGTCT GTTCAACATC AGACTTGTTA ACATTTGACC ATTATGAACA AGAAGTGAAA
AATAGGTGAA AATTTTTGTA AGAGTACAAC CGTGTCTCAT ATCAAACAAC TAAAGTATTC
ATTCTGAACA GTGAGGATTT TGAAACGAAA CACCTATCAA ATTTGAGGTT GACTAATAAT
AGCTCGTTGA ACGTAGATGA ACATTGGAAA ATCGTTGGCT TCCACAGATA GCTGAAATTT
CAAACTATCT ACTAGTTATC GATATCAAAT TCCTCCGAGC TACAGAAAAG ATTACCATTT
CACATCACTT TCATTCGAGT ACATTTGACT TTCACTTATC TCAGAATCAA CAGCTTCTTG
AAAAATTTCA AACGTCCAAT TTACTAACAT AGCTTCTAGT ATACGTTAAA GGTAAGCACA
TTTCTTACCA AAGATCTAAG AATGTCACCA ACCCAAACGT GTCTTTGATT CAAATCGAAG
GTGTTGCCAA CCCACAAGAC GCCAAGTTCT ACTTGGGTAA GAGAATCGCT TACGTCTACA
GAGCTTCCAA GGAAGTTAGA GGTTCTAAGA TCAGAGTCAT CTGGGGTAAG GTCGCCAGAA
CCCACGGTAA CAACGGTTTG GTCAGAGCCA CCTTCAAGAA GAACTTGCCA GCTAAGACTT
TCGGTGCTTC CGTCAGAATC ATGTTATATC CATCTAACAT CTAAGTTTAA ACAAGATTTA
TGAAACACGG TTTGTAATAT TGGTTTAGGT CTTTTATTCT TTTTTAGAAC TTTCCACAAA
ATATAGAAGG TTTTAATACA TACAACATTT TAATTATTGA AAAAGATGAT GCAACTAAGA
ATGGCAACTA AACCAATTTT CAAAGACTGA AATGGTTCTG GATAACTCTA AGGTTCGTCT
CGGTGGTTAT CTAGTCTAAA GTTCTTTAAG TAATTTGTAT ATTTATCCCA TAATAAATTT
AAAAACACTC GAAATATTCA TTTGACTTTT AT
 
Protein sequence
MAESHRLYVK GKHISYQRSK NVTNPNVSLI QIEGVANPQD AKFYLGKRIA YVYRASKEVR 
GSKIRVIWGK VARTHGNNGL VRATFKKNLP AKTFGASVRI MLYPSNI